Table 1 |
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A comparison of the quality of material expected from the Celera Drosophila sequence to that achieved for use in assembly |
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Description |
Expectation |
Final result |
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|
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Shotgun coverage |
10x |
14.6x |
|
Basepairs/read |
500 |
551 |
|
Reads in pairs |
70% |
72% |
|
Insert length distance |
+/-3% variation |
+/-3% variation |
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False positive rate on mate pairs |
<1% |
<0.34% |
|
Map-coverage (BAC pairs) |
15x |
13.18x |
|
Long-to-short ratio |
1-4 |
1-1.32 |
|
|
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Ussery Genome Biology 2000 1:reports4014.1 doi:10.1186/gb-2000-1-3-reports4014 |
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