|
Whole-genome DNA alignments using MUMmer |
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| Organism 1 |
Organism 2 |
Total |
Matches |
Probability* |
| MUMs |
within |
|||
| diagonal |
||||
| (10%) |
||||
|
|
||||
| V. cholerae |
E. coli |
459 |
177 |
4.7 ± 10-59 |
| V. cholerae (rev) |
E. coli |
467 |
217 |
1.8 ± 10-90 |
| V. cholerae (rev) |
V. cholerae |
342 |
86 |
8.2 ± 10-16 |
| E. coli (rev) |
E. coli |
1,128 |
225 |
1.5 ± 10-23 |
| S. pyogenes |
S. pneumoniae |
706 |
259 |
4.5 ± 10-80 |
| S. pyogenes (rev) |
S. pneumoniae |
626 |
255 |
2.3 ± 10-90 |
| S. pyogenes (rev) |
S. pyogenes |
367 |
96 |
1.1 ± 10-18 |
| S. pneumoniae (rev) |
S. pneumoniae |
1,054 |
154 |
1.5 ± 10-6 |
| M. leprae (rev) |
M. leprae |
449 |
89 |
3.5 ± 10-10 |
| M. tuberculosis (rev) |
M. tuberculosis |
2,476 |
268 |
0.092 |
| E. coli |
M. tuberculosis |
81 |
13 |
0.06 |
| E. coli (rev) |
M. tuberculosis |
70 |
5 |
0.84 |
|
*Statistical significance was estimated as described in the text; rev, reverse complement sequence. | ||||
Eisen et al. Genome Biology 2000 1:research0011.1 doi:10.1186/gb-2000-1-6-research0011 |
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