Table 2

Whole-genome protein-level comparisons

Organism 1
Organism 2
Total
Matches
Probability*


matches
within




10%




diagonal


Top matches




     V. cholerae
E. coli
1,797
369
3.2 ± 10-40
     V. cholerae (rev)
E. coli
1,797
441
2.3 ± 10-70
     V. cholerae
V. cholerae
701
145
3.6 ± 10-17
     V. cholerae (rev)
V. cholerae
701
70
0.52
     E. coli
E. coli
1,985
286
3.6 ± 10-10
     E. coli (rev)
E. coli
1,985
210
0.20
Recent duplications




     V. cholerae
V. cholerae
195
60
1.0 ± 10-15
     V. cholerae (rev)
V. cholerae
195
26
8.4 ± 10-4

*Statistical significance was estimated as described in the text. Best match to another V. cholerae ORF versus any other complete genome.

Eisen et al. Genome Biology 2000 1:research0011.1   doi:10.1186/gb-2000-1-6-research0011