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The genetic structure of recombinant inbred mice: high-resolution consensus maps for complex trait analysis

Robert W Williams123*, Jing Gu13, Shuhua Qi23 and Lu Lu123

Author Affiliations

1 Center of Genomics and Bioinformatics University of Tennessee Health Science Center, College of Medicine, Memphis, TN 38163, USA

2 Center for Neuroscience University of Tennessee Health Science Center, College of Medicine, Memphis, TN 38163, USA

3 Department of Anatomy and Neurobiology, University of Tennessee Health Science Center, College of Medicine, Memphis, TN 38163, USA

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Genome Biology 2001, 2:research0046-research0046.18  doi:10.1186/gb-2001-2-11-research0046


A previous version of this manuscript was made available before peer review at http://genomebiology.com/2001/2/8/preprint/0007/

Published: 22 October 2001

Additional files

Additional data file 1:

A 1.9 MB graphic rendition suitable for use image and illustration programs. This figure is a single page wide but is approximately 10 meters long (this file may require increased RAM to download).

Format: GIF Size: 1.9MB Download file

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Additional data file 2:

A 812 KB file in Macintosh Map Manager QT format. This file was used for much of the data analysis.

Format: MM Size: 810KB Download file

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Additional data file 3:

A 876 KB file in generic tab-delimited text format. This file was generated as a text export from the Map Manager QT file.

Format: TXT Size: 877KB Download file

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Additional data file 4:

A 1.2 MB file in Microsoft Excel format (Excel 2000 or later).

Format: XLS Size: 1.2MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 5:

A 24 KB file in QGENE format. QGENE is a quantitative genetics program (Macintosh OS 9 compatible) used to compare genometypes of pairs of strains.

Format: MAP Size: 20KB Download file

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Additional data file 6:

A 188 KB companion file used by QGENE (see above).

Format: POP Size: 186KB Download file

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Additional data file 7:

A 352 KB MAPMAKER file. MAPMAKER is a widely used genetic mapping program.

Format: RAW Size: 353KB Download file

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Additional data file 8:

A 888 KB Map Manger QTX file. This file can be used with Map Manager QTX (Windows or Macintosh OS).

Format: MM Size: 887KB Download file

Open Data

Additional data file 9:

A 1.1 MB Microsoft Excel file. Data analysis for the AXB and BXA strains only.

Format: XLS Size: 1.1MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 10:

A 1.1 MB Microsoft Excel file. Data analysis for the first 26 BXD strains.

Format: XLS Size: 1.1MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 11:

A 1.1 MB Microsoft Excel file. Data analysis for 34 extant BXD strains.

Format: XLS Size: 1.1MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 12:

A 1.1 MB Microsoft Excel file. Data analysis for BXH strains.

Format: XLS Size: 1.1MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 13:

A 1.1 MB Microsoft Excel file. Data analysis for 102 BXN strains.

Format: XLS Size: 1.1MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 14:

A 5.7 MB Microsoft Excel file. Data analysis and equations used to compute non-syntenic associations.

Format: XLS Size: 5.7MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional data file 15:

A 1.1 MB Microsoft Excel file. Data analysis for 13 CXB strains.

Format: XLS Size: 1.1MB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional data file 16:

A 2.7 MB GIF image of the the correlations between pairs of loci (this file may require increased RAM to download).

Format: GIF Size: 2.7MB Download file

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Additional data file 17:

A 284 Microsoft Excel file that can be used to compare the overall genetic similarity of any two strains that are members of the BXN set. This file is an extended version of Table 6.

Format: XLS Size: 283KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data