Table 1 |
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|
Characteristics of deleted regions containing DNA repair loci that have been lost during the evolution of Buchnera |
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|
Deleted gene |
Functional role |
Within/between syntenic fragments |
Size of deleted region (nucleotides) |
Number of genes in deleted region |
|
|
||||
|
ada |
Direct damage reversal |
Between |
25,426 |
27 |
|
ogt |
Direct damage reversal |
Between |
88,327 |
83 |
|
tag |
Base excision repair |
Between |
33,065 |
30 |
|
mutM |
Base excision repair |
Between |
809 |
1 |
|
mutH |
Mismatch repair |
Within |
9,601 |
8 |
|
recJ |
Mismatch repair |
Within |
4,533 |
6 |
|
uvrD |
Mismatch repair |
Between |
11,325 |
12 |
|
recA |
Recombinase pathway |
Between |
9,884 |
10 |
|
recF |
Recombinase pathway |
Within |
1,073 |
1 |
|
recN |
Recombinase pathway |
Within |
1,661 |
1 |
|
uvrA |
UV excision repair |
Within |
6,579 |
6 |
|
uvrB |
UV excision repair |
Between |
60,515 |
64 |
|
uvrC |
UV excision repair |
Between |
27,558 |
34 |
|
|
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|
Moran and Mira Genome Biology 2001 2:research0054.1 doi:10.1186/gb-2001-2-12-research0054 |
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