Table 1 |
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Aligned sequences homologous to molecular beacons E8/E9 and E9/E10 |
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(a) Beacon E8/E9 sequence |
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1 |
Human SHMT-ps1 |
CCGCACGATCTTCTACAG/GAAAGGAGGGC |
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2 |
Chimpanzee SHMT-ps1 |
CCGCACGATCCTCTACAG/GAAAGGAGTGC |
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3 |
Gorilla SHMT-ps1 |
CCGCACGATCTTCTACAG/GAAAGGAGGGT |
|
4 |
Orangutan SHMT-ps1 |
CCGCACGATCCTCTACAG/GAAAGGAGGGC |
|
5 |
Gibbon SHMT-ps1 |
CCGCACGATCTTCTACAG/GAAAGGAGGGT |
|
6 |
Macaque SHMT-ps-1 |
AGCCGGCATGATCTACGG/GAAAGGAGTGC |
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7 |
Baboon SHMT-ps1 |
AGCCGGCATGATCTACGG/GAAAGGAGTGC |
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8 |
Capuchin SHMT-ps1 |
CCGCACGATCTCCTACAG/GAAAGGAGGGC |
|
9 |
Spider monkey SHMT-ps1 |
CCGCACGATCTCCTACAG/GAAAGGAGGGC |
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10 |
Tamarin SHMT-ps1 |
CGGCACGATCTTCTACAG/GAAAGGAGGGC |
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11 |
Human SHMT-cyt cDNA |
TGGCATGATCTTCTACAG/GAAAGGAGBGA |
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12 |
Rabbit SHMT-cyt cDNA |
CGGCATGATCTTCTACAG/GAGAGGAGTGC |
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13 |
Sheep SHMT-cyt cDNA |
CGGCATGATCTTCTACAG/GAAGGGAGTGC |
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(b) Beacon E9/E10 sequence |
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1 |
Human SHMT-ps1 |
CACAACCACACCATTGCTG/GGGTTGCTG |
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2 |
Chimpanzee SHMT-ps1 |
CACAACCACGCCACTGCTG/GGGTTGCTG |
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3 |
Gorilla SHMT-ps1 |
CACAACCACACCATTGTTG/GGGTTGCTG |
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4 |
Orangutan SHMT-ps1 |
CACAACCACACCATTGCTG/GGGTTGCTG |
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5 |
Gibbon SHMT-ps1 |
CACAACCACACCATTGTTG/GGGTAGCTG |
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6 |
Macaque SHMT-ps-1 |
CACAACCATGCCATTGCTG/GGGTTGCTG |
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7 |
Baboon SHMT-ps1 |
CACAACCATGCTATTGCTG/GGGTTGCTG |
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8 |
Capuchin SHMT-ps1 |
CACAACCACACCATTGTTG/GGGTTGCTG |
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9 |
Spider monkey SHMT-ps1 |
CACAACCACACCATTGTTG/GGGTAGCTG |
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10 |
Tamarin SHMT-ps1 |
CACAACCAAACCAATGCTG/GGGTTTCTG |
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11 |
Human SHMT-cyt cDNA |
CACAACCACGCCATTGCTG/GGGTTGCTG |
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12 |
Rabbit SHMT-cyt cDNA |
CACAACCACGCCATCGCAG/GGGTGGCCG |
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13 |
Sheep SHMT-cyt cDNA |
CACAACCACGCCATTGCTG/GGGTCGCGG |
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Exon/exon boundaries are indicated with a slash, and nucleotide differences from sequence 1 are in bold. Sequence sources are as follows: 1-10, all from [7]; 11, GenBank L11931; 12, GenBank Z11846; 13, GenBank X80024. |
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Devor Genome Biology 2001 2:research0006.1 doi:10.1186/gb-2001-2-2-research0006 |
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