Table 2

Complete homologies with known genes
Clone names
 Homology to
 Homologous
 Homology to
 Chromo-
 Homologous
 In between
 Distance

normal database
 region, extent
 human clone
 some
 region, extent
 markers
 from P-tel

(identity),
 of similarity
 (HTGS)
of similarity
(kb)

accession
 (bp)*, identity
 accession
(bp)*, identity


number
 (bp/bp)†
 number
(bp/bp)†

14-49, 336 bp
 NM_004228.2 Hs
 22-317, 296/296
 AC073131
 19
 110-225,116/116
 D19S902 &
 68477

coiled/coil domain 2


223-317, 95/95
 sTSg58178

(cytohesin-2)





24-51, 234 bp
 NM_000943.1 Hs
 33-220, 186/186
 AC012424,
 5
 99-220,121/122
 RH101603 &
 153095

peptidylprolyl



RH103740

isomerase C






cyclophilin





3s-1, 121 bp
 NM_006870.2 Hs
 20-109, 90/90
 Al132765,
 20
 20-109, 90/90
 WI-22195 &
 25762

(actin depolymerizing



RH123144

factor)





6034, 82 bp
 NM_004447.1 Hs
 18-66, 49/49
 NSH
 NA
 NA
 NA
 NA

epidermal growth






factor receptor






kinase





6086, 115 bp
 M27024 Hs
 19-115, 91/97
 AL133223.3
 14
 19-115, 91/97
 H14a433 &
 119103

heat shock protein



D14S305



AC024731
 11
 21-117, 90/97
 NMF
 NA
6092, 71 bp
 NM_004602.1 Hs
 29-71, 41/43
 AC068845
 19
 29-71, 41/43
 NMF
 NA

staufen(STAU)






(Dm RNA-binding






protein)





9661, 257 bp
 M31516.1 Hs
 17-236, 218/220
 AL355527
 1
 17-236, 218/220
 NMF
 NA

decay-accelerating






factor mRNA





968, 104 bp
 AF203815 Hs
 23-87, 63/65
 AP000769
 11
 23-87, 63/65
 NMF
 NA

alpha gene sequence





*Extent of similarity, the number corresponds to the starting and ending base pair in the respective homologous gene with the EST. †Identity, the number corresponds to the identical base pair of EST/homologous gene. NA, not applicable; Hs, Homo sapiens; Dm, Drosophila melanogaster; Dr, Drosophila radiodurans. NSH, no significant homology (identity less than 20 bases); NMF, no matches found.

Maiti et al. Genome Biology 2001 2:research0026.1   doi:10.1186/gb-2001-2-7-research0026

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