Genome Biology

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A draft annotation and overview of the human genome

Fred A Wright, William J Lemon, Wei D Zhao, Russell Sears, Degen Zhuo, Jian-Ping Wang, Hee-Yung Yang, Troy Baer, Don Stredney, Joe Spitzner, Al Stutz, Ralf Krahe and Bo Yuan*

Genome Biology 2001, 2:research0025-research0025.18 doi:10.1186/gb-2001-2-7-research0025


A previous version of this manuscript was made available before peer review at http://genomebiology.com/2001/2/3/preprint/0001/

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Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions

Victor G Levitsky, Elena V Ignatieva, Elena A Ananko, Igor I Turnaev, Tatyana I Merkulova, Nikolay A Kolchanov, TC Hodgman BMC Bioinformatics 2007, 8:481 (19 December 2007)

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A comprehensive transcript index of the human genome generated using microarrays and computational approaches

Eric E Schadt, Stephen W Edwards, Debraj GuhaThakurta, Dan Holder, Lisa Ying, Vladimir Svetnik, Amy Leonardson, Kyle W Hart, Archie Russell, Guoya Li, Guy Cavet, John Castle, Paul McDonagh, Zhengyan Kan, Ronghua Chen, Andrew Kasarskis, Mihai Margarint, Ramon M Caceres, Jason M Johnson, Christopher D Armour, Philip W Garrett-Engele, Nicholas F Tsinoremas, Daniel D Shoemaker Genome Biology 2004, 5:R73 (23 September 2004)

A combination of microarray data with extensive genome annotations resulted in a set of 28,456 experimentally supported transcripts, providing the first experiment-driven annotation of the human genome.