Long terminal repeat retrotransposons of Oryza sativa
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* Corresponding author: Eugene M McCarthy gm@uga.edu
Genome Biology 2002, 3:research0053-research0053.11 doi:10.1186/gb-2002-3-10-research0053
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BioMed Central: 9 citations
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Alexandros Bousios, Nikos Darzentas, Athanasios Tsaftaris, Stephen R Pearce BMC Genomics 2010, 11:89 (4 February 2010) |
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Hao Wang, Zhao Xu, Hongjie Yu BMC Genomics 2008, 9:565 (27 November 2008) |
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LTR retrotransposon landscape in Medicago truncatula: more rapid removal than in rice Hao Wang, Jin-Song Liu BMC Genomics 2008, 9:382 (10 August 2008) |
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Discovery notes
Endogenous retroviruses of the chicken genome Ahsan Huda, Nalini Polavarapu, I King Jordan, John F McDonald Biology Direct 2008, 3:9 (24 March 2008) |
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Software
LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons David Ellinghaus, Stefan Kurtz, Ute Willhoeft BMC Bioinformatics 2008, 9:18 (14 January 2008) |
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Research article
Transposable element distribution, abundance and role in genome size variation in the genus Oryza Andrea Zuccolo, Aswathy Sebastian, Jayson Talag, Yeisoo Yu, HyeRan Kim, Kristi Collura, Dave Kudrna, Rod A Wing BMC Evolutionary Biology 2007, 7:152 (29 August 2007) |
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Research
A genome-wide transcriptional activity survey of rice transposable element-related genes Yuling Jiao, Xing Deng Genome Biology 2007, 8:R28 (27 February 2007) A genome-wide survey of the transcriptional activity of TE-related genes that were associated with fifteen developmental stages and stress conditions revealed clear, albeit low, general transcription of TE-related genes. |
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Research
Identification, characterization and comparative genomics of chimpanzee endogenous retroviruses Nalini Polavarapu, Nathan J Bowen, John F McDonald Genome Biology 2006, 7:R51 (28 June 2006) The identification and characterization of 42 families of chimpanzee endogenous retroviruses and a comparison to their human orthologs is described. |
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Research
Long terminal repeat retrotransposons of Mus musculus Eugene M McCarthy, John F McDonald Genome Biology 2004, 5:R14 (13 February 2004) This article describes the identification of long terminal repeat retrotransposons in the mouse genome. These elements can be classified in to 21 families, of which 13 have not been described previously. |