|
ANOVA test results of the five sequences |
|||||
| df |
SS |
MS |
F-value |
p-value |
|
|
|
|||||
| MHC class III (sw = 2, w = 16) |
|||||
|
|
|||||
| between windows |
1 |
0.0009159 |
0.0009159 |
1.781 |
0.192 |
| within windows |
30 |
0.01543 |
0.0005143 |
||
|
|
|||||
| MHC class II (sw = 3, w = 15) |
|||||
|
|
|||||
| between windows |
2 |
0.001658 |
0.0008288 |
1.162 |
0.323 |
| within windows |
42 |
0.02997 |
0.0007137 |
||
|
|
|||||
| random seq similar to class III (sw = 2, w = 16) |
|||||
|
|
|||||
| between windows |
1 |
0.00000288 |
0.00000288 |
0.247 |
0.623 |
| within windows |
30 |
0.0003496 |
0.00001165 |
||
|
|
|||||
| random seq similar to class II (sw = 3, w = 15) |
|||||
|
|
|||||
| between windows |
2 |
0.00004546 |
0.00002273 |
1.884 |
0.165 |
| within windows |
42 |
0.0005066 |
0.00001206 |
||
|
|
|||||
| B. burgdorferi (sw = 3, w = 15) |
|||||
|
|
|||||
| between windows |
2 |
0.0002064 |
0.0001032 |
0.671 |
0.517 |
| within windows |
42 |
0.006461 |
0.0001538 |
||
|
ANOVA test results of the five sequences (two MHC isochore sequences and their randomized sequences, and bacterium Borrelia burgdorferi sequence), df: degrees of freedom; SS: sum of squares. MS: mean squares. F-value: test statistic value; p-value: p-value from the ANOVA test. sw and w are the number of super-windows and windows. | |||||
Li et al. Genome Biology 2002 3:preprint0009.1 doi:10.1186/gb-2002-3-11-preprint0009 |
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