|
Overlap of nodes and edges between the four types of network |
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| (a) |
Nodes |
Chromo |
Fusion |
Phylo |
Combined |
|
|
|||||
| Chromo |
41 (6) |
31 (3) |
100 (0) |
||
| Fusion |
72 (6) |
30 (3) |
100 (0) |
||
| Phylo |
75 (10) |
41 (6) |
100 (0) |
||
| Combined |
80 (6) |
46 (6) |
34 (4) |
||
| (b) |
Edges |
Chromo |
Fusion |
Phylo |
Combined |
|
|
|||||
| Chromo |
14 (2) |
11 (1) |
100 (0) |
||
| Fusion |
20 (4) |
7 (2) |
100 (0) |
||
| Phylo |
14 (7) |
6 (2) |
100 (0) |
||
| Combined |
43 (10) |
30 (7) |
38 (11) |
||
|
Element in row i column j is the percentage of average nodes (a) or average edges (b) in network of type i that are also found in network of type j, with the standard deviation in parentheses. For example, 75% of the nodes found by phylogenetic profiling are contained in the chromo networks. This should, however, be contrasted with the finding that only 14% of the functional links in the phylo networks are in chromo networks. | |||||
Yanai and DeLisi Genome Biology 2002 3:research0064.1 doi:10.1186/gb-2002-3-11-research0064 |
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