Genome Biology

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Highly Access Review

Finding signals that regulate alternative splicing in the post-genomic era

Andrea N Ladd and Thomas A Cooper*

Author Affiliations

Department of Pathology, Baylor College of Medicine, Houston, TX 77030, USA

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Genome Biology 2002, 3:reviews0008-reviews0008.16 doi:10.1186/gb-2002-3-11-reviews0008

Published: 23 October 2002

Abstract

Alternative splicing of pre-mRNAs is central to the generation of diversity from the relatively small number of genes in metazoan genomes. Auxiliary cis elements and trans-acting factors are required for the recognition of constitutive and alternatively spliced exons and their inclusion in pre-mRNA. Here, we discuss the regulatory elements that direct alternative splicing and how genome-wide analyses can aid in their identification.