Table 3 |
||||
|
Present genes of H. pylori strains |
||||
|
Strain |
Number of present genes found in the original publication [11] |
Number of present genes found by our constant-cutoff reanalysis |
Number of present genes found by GACK trinary analysis |
Difference between GACK and [11] |
|
|
||||
|
SS1 |
1,463 |
1,467 |
1,256 |
-207 |
|
G50 |
1,499 |
1,501 |
1,371 |
-128 |
|
SPM-314 |
1,526 |
1,529 |
1,289 |
-237 |
|
H34 |
1,449 |
1,450 |
1,249 |
-200 |
|
J99 |
1,511 |
1,511 |
1,309 |
-202 |
|
AR32 |
1,510 |
1,513 |
1,251 |
-259 |
|
SPM-292 |
1,453 |
1,455 |
1,242 |
-211 |
|
26695 |
1,556 |
1,557 |
1,398 |
-158 |
|
87A300 |
1,487 |
1,490 |
1,185 |
-302 |
|
G27 |
1,476 |
1,478 |
1,288 |
-188 |
|
NCTC11638 |
1,502 |
1,503 |
1,445 |
-57 |
|
SPM-342 |
1,477 |
1,475 |
1,302 |
-175 |
|
SPM-326 |
1,514 |
1,513 |
1,241 |
-273 |
|
G39 |
1,488 |
1,499 |
1,345 |
-143 |
|
HP1 |
1,506 |
1,508 |
1,284 |
-222 |
|
Mean |
1,494 |
1,497 |
1,297 |
-197 |
|
|
||||
|
Kim et al. Genome Biology 2002 3:research0065.1 doi:10.1186/gb-2002-3-11-research0065 |
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