Exploring prokaryotic diversity in the genomic era
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Correspondence: Philip Hugenholtz philiph@nature.berkeley.edu
Genome Biology 2002, 3:reviews0003-reviews0003.8 doi:10.1186/gb-2002-3-2-reviews0003
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BioMed Central: 5 citations
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Research article
Polytomy identification in microbial phylogenetic reconstruction Guan Lin, Chao Zhang, Dong Xu BMC Systems Biology 2011, 5(Suppl 3):S2 (23 December 2011) |
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Proceedings
Samuel A Smits, Cleber C Ouverney BMC Bioinformatics 2010, 11(Suppl 6):S18 (7 October 2010) |
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Research
Archaic chaos: intrinsically disordered proteins in Archaea Bin Xue, Robert W Williams, Christopher J Oldfield, A Dunker, Vladimir N Uversky BMC Systems Biology 2010, 4(Suppl 1):S1 (28 May 2010) |
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Research article
Alignment and clustering of phylogenetic markers - implications for microbial diversity studies James R White, Saket Navlakha, Niranjan Nagarajan, Mohammad-Reza Ghodsi, Carl Kingsford, Mihai Pop BMC Bioinformatics 2010, 11:152 (24 March 2010) An assessment of methodologies for clustering sequences into operational taxonomic units demonstrates that small changes in algorithm parameters can lead to inflated estimates of microbial diversity, but semi-supervised clustering can produce a more robust result.
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Commentary
The case for biocentric microbiology Ramy Aziz Gut Pathogens 2009, 1:16 (4 August 2009) |