Table 1

Lists of specificity-determining residues as predicted by different methods

Method
DNA-binding Domain
Ligand-binding Domain

Model 1, eq (3)
P < 10-5I > 1.0 : 15,16,50,55
P < 10-5I > 1.5 : 98,114,122,146,147,160,221,249
Model 1, eq (4)
P < 10-4I > 1.0 : 15,16,50,55
P < 10-4I > 1.5 : 98,114,146,160,221
Model 2
P < 10-2 : 15,16,55
P < 10-2 : 85,98,122,146,160,221,246,249

Numbering is according to 1wet PDB file. See Supplementary Information for equations and details.

Mirny and Gelfand Genome Biology 2002 3:preprint0002.1   doi:10.1186/gb-2002-3-3-preprint0002