Genome Biology

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Phylogenetic analysis of the human basic helix-loop-helix proteins

Valérie Ledent, Odier Paquet and Michel Vervoort*

Genome Biology 2002, 3:research0030-research0030.18 doi:10.1186/gb-2002-3-6-research0030

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Research article   Open Access

Evolution of the holozoan ribosome biogenesis regulon

Seth J Brown, Michael D Cole, Albert J Erives BMC Genomics 2008, 9:442 (24 September 2008)

Research article   Open Access

atonal- and achaete-scute-related genes in the annelid Platynereis dumerilii: insights into the evolution of neural basic-Helix-Loop-Helix genes

Elena Simionato, Pierre Kerner, Nicolas Dray, Martine Le Gouar, Valérie Ledent, Detlev Arendt, Michel Vervoort BMC Evolutionary Biology 2008, 8:170 (9 June 2008)

Research article   Open Access

Analysis of four achaete-scute homologs in Bombyx mori reveals new viewpoints of the evolution and functions of this gene family

Qingxiang Zhou, Tianyi Zhang, Weihua Xu, Linlin Yu, Yongzhu Yi, Zhifang Zhang BMC Genetics 2008, 9:24 (6 March 2008)

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Regulatory module network of basic/helix-loop-helix transcription factors in mouse brain

Jing Li, Zijing J Liu, Yuchun C Pan, Qi Liu, Xing Fu, Nigel GF Cooper, Yixue Li, Mengsheng Qiu, Tieliu Shi Genome Biology 2007, 8:R244 (19 November 2007)

A comprehensive regulatory module network of 15 bHLH transcription factors over 150 target genes in mouse brain has been constructed.

Methodology article   Open Access Highly Accessed

An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network

Brian J Holden, John W Pinney, Simon C Lovell, Grigoris D Amoutzias, David L Robertson BMC Bioinformatics 2007, 8:289 (6 August 2007)

Research   Open Access Highly Accessed

A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks

John S Reece-Hoyes, Bart Deplancke, Jane Shingles, Christian A Grove, Ian A Hope, Albertha JM Walhout Genome Biology 2005, 6:R110 (30 December 2005)

A compendium of 934 transcription factor genes in C. elegans and identified by computational searches and extensive manual

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An overview of the basic helix-loop-helix proteins

Susan Jones Genome Biology 2004, 5:226 (28 May 2004)

The basic helix-loop-helix proteins, dimeric transcription factors, are found in almost all eukaryotes and in animals are important regulators of embryonic development.