Table 3

E+K, and Q+H contents (%) in the 28 proteomes and E+K/Q+H ratios for the Proteome, Chaperonin and Ligase in each organism


Proteome
 Chaperonin
 Ligase
Strains
 E+K/Q+H
 E+K(%)
 Q+H (%)
 G+C(%)
 E+K/Q+H
 E+K/Q+H
Hiper - Procarya





P. abyssi
 5.21
 16.53
 3.17
 44.6
 5.68
 5.72
P. horikoshii
 5.35
 16.87
 3.15
 42.0
 5.33
 4.9
A. aeolicus
 5.31
 19.01
 3.58
 43.2
 5.47
 9.39
M. jannashii
 6.63
 19.04
 2.87
 31.3
 6.73
 8.18
A. fulgidus
 4.8
 15.76
 3.28
 43.2
 5.3
 5.4
T. matitima
 4.6
 16.53
 3.59
 46.1
 7.64
 6.18
Termo - Procarya





M. thermoautotroficum
 3.28
 12.5
 3.81
 49.5
 3.93
 3.85
T. volcanium
 3.63
 13.13
 3.61
 39.9
 3.9
 5.19
T. acidophilum
 2.95
 11.1
 3.76
 45.9
 3.64
 6.89
Sulfulobus
 4.6
 15.46
 3.36
 35.7
 3.57
 5.06
Meso - Procarya





E. coli
 1.47
 9.98
 6.75
 50.7
 5.3
 2.7
V. cholerae
 1.47
 11.08
 7.49
 47.6
 2.1
 1.8
D. radiodurans
 1.36
 8.47
 6.19
 66.9
 6.89
 2.05
M. tuberculosis
 1.1
 6.32
 5.75
 65.6
 3.32
 2.62
N. miningitidis
 1.89
 11.75
 6.22
 51.4
 3.69
 1.53
M. genitalium
 2.45
 15.61
 6.36
 35
 6.5
 2.31
T. pallidum
 1.51
 9.95
 6.57
 52.7
 6.21
 1.26
P. aeruginosa
 1.21
 8.4
 6.9
 66.4
 4.8
 2.25
H. influenza
 1.93
 12.82
 6.64
 38
 4.8
 2.18
B. subtilis
 2.35
 14.22
 6.05
 43.5
 5.32
 3.76
Synechocystis
 1.38
 10.24
 7.39
 47.6
 4.23
 1.53
X. fastidiosa
 1.23
 8.51
 6.92
 52.6
 4.8
 1.00
Halobacterium sp
 1.67
 8.58
 5.15
 66.88
 1.84
 2.19
Meso - Eucarya





S. cerevisiae
 2.25
 13.79
 6.12
 39.7
 2.93
 3.33
C. elegans
 2.00
 12.88
 6.42
 42.6
 2.88
 3.3
A. thaliana
 2.28
 13.01
 5.74
 44.2
 2.22
 3.2
D. melanogaster
 1.51
 11.99
 7.92
 53.9
 5.31
 1.44
H. sapiens
 1.77
 12.68
 7.17
 52.66
 5.41
 2.57

de Farias and Bonato Genome Biology 2002 3:preprint0006.1   doi:10.1186/gb-2002-3-8-preprint0006