Table 2

Classification rules

Gene name

'Simultaneous' rules

Supporting information

'Time delay' and 'changes' rules

Supporting information


SWI5

-CLB1⇔-SWI5

[19]

-

-

-CLB2⇔-SWI5

[33]

CLN1

+CLN2⇔+CLN1

[22]

-

-

-CDC20⇔+CLN1

CLN2

-CLB2⇔+CLN2

[20]

±CLB1CLN2

[20]

+SWI5⇔-CLN2

[18]

[18]

CLB1

± CLB2⇔±CLB1

[19]

+CLB6⇒-CLB1

[19]

↑↓ CLB2⇔↑↓ CLB1

[21]

CLB2

-CLB1⇔-CLB2

[19]

+CLB6⇒-CLB2

[19]

↑↓ CLB1⇔↑↓ CLB2

[21]

CLB5

+CLB6⇔+CLB5

[15]

-

-

CLB6

+CLB5⇔ +CLB6

[15]

-

-

MBP1

CDC34⇔±MBP1

[34]

↑↓ CDC34⇔↑↓ MBP1

[34]

CDC34

+MBP1⇔-CDC34

[34]

-

-

SKP1

+MBP1⇔-SKP1

[15]

↑↓ CDC34⇔↑↓ SKP1

[35]

SWI5

-

-

CLN2⇔↓ SWI5

[18]

± CLB1⇒ ± SWI5

[20]

-CLB1-CLN3⇒+SWI5

CLN1

-

-

+SWI5⇒-CLN1

[20]

-CLB2⇒+CLN1

CLB5

-

-

↑↓ CLN2⇔↑↓ CLB5

[18]


Classification rules with high accuracy in all three accuracy tests (CV-10 and cdc28, alpha-factor test sets) are shown in the upper part of the table. Questionable rules (see Classification rules for explanation) are shown in the lower part of the table.

Soinov et al. Genome Biology 2003 4:R6   doi:10.1186/gb-2003-4-1-r6

Open Data