Genome Biology

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Time- and exercise-dependent gene regulation in human skeletal muscle

Alexander C Zambon1, Erin L McDearmon2, Nathan Salomonis1, Karen M Vranizan4,1, Kirsten L Johansen3, Deborah Adey3, Joseph S Takahashi2, Morris Schambelan3 and Bruce R Conklin3,1*

Author Affiliations

1 Gladstone Institute of Cardiovascular Disease, Department of Medicine, University of California, San Francisco, CA 94141, USA

2 Howard Hughes Medical Institute, Department of Neurobiology and Physiology, Northwestern University, Evanston, IL 60208, USA

3 Department of Medicine, University of California, San Francisco, CA 94141, USA

4 Functional Genomics Lab, University of California, Berkeley, CA 94720, USA

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Genome Biology 2003, 4:R61 doi:10.1186/gb-2003-4-10-r61

Published: 25 September 2003

Additional files

Additional data file 1:

The Affymetrix data (MAS 4.0, target intensity 800) from rat 6 hours after exercise

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Additional data file 2:

Log2 RMA signal values, fold changes, P values and probe level annotation, and descriptions of column titles

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Additional data file 3:

Information for linking orthologous probe sets between Affymetrix Hs. U95A, Mm. U74A and Rn. U34A arrays

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Additional data file 4:

Hs RE/rat total RE and Hs RE/rat polysomal RE of 6 h after exercise-regulated gene orthologs regulated in this study and those published by Chen et al.

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Additional data file 5:

The putative circadian overlap genes

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Additional data file 6:

The unfiltered output results from the MAPPFinder analysis

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Additional data file 7:

An animation is provided to illustrate the experimental protocol and time course

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