Table 5

Most conserved nematode genes between M. incognita and C. elegans

M. incognita cluster/contig*

ESTs per cluster

Wormpep accession

C. elegans gene

Assignment

E-value

MI00487.cl / MI01030

44

CE13150

T04C12.5

ACT-2, actin 2

1e-240

MI00951.cl / MI01122

77

CE20658

F08B6.4

UNC-87, calponin

1e-193

MI00892.cl / MI00892

7

CE02619

F10C1.2

Intermediate filament protein

1e-180

MI00666.cl / MI00666

4

CE07537

T25F10.6

Calponin like protein

2e-155

MI00750.cl / MI00805

5

CE12204

K12F2.1

MYO-3, myosin heavy chain

1e-148

MI00701.cl / MI00820

4

CE03403

F52H3.7

LEC-2, galactoside-binding lectin

8e-143

MI00590.cl / MI00661

3

CE18478

B0250.1

Ribosomal protein L2

4e-134

MI00081.cl / MI00081

2

CE09349

F11C3.3

UNC-54, myosin heavy chain

3e-127

MI00721.cl / MI01033

4

CE02181

F13D12.2

LDH-1, l-lactate dehydrogenase

4e-125

MI01008.cl / MI01008

16

CE25005

F54H12.1

Aconitate hydratase

5e-122

MI00918.cl / MI00918

8

CE15900

F25H5.4

EFT-2, elongation factor Tu family

2e-119

MI01789.cl / MI01789

1

CE25977

T01A4.1

Guanylyl cyclase

8e-119

MI01065.cl / MI01065

4

CE00664

F56F3.5

Ribosomal protein S3a

8e-117

MI00900.cl / MI00900

7

CE16333

T03E6.7

cathepsin-like protein

4e-115

MI00792.cl / MI00792

5

CE03684

T21B10.2

Enolase

7e-115

MI00809.cl / MI00809

6

CE03368

F49C12.8

RPN-7, proteasome regulatory particle

9e-115

*Contig shown is the consensus sequence within the cluster which generated the most significant E-value score.

McCarter et al. Genome Biology 2003 4:R26   doi:10.1186/gb-2003-4-4-r26