|
Two-by-two contingency table for flagged and unflagged genes in a GO category |
|||
| Flagged genes |
Non-flagged genes |
Total |
|
|
|
|||
| In category |
nf |
n - nf |
n |
| Not in category |
Nf - nf |
(N - n) - (Nf - nf) |
N - n |
| Total |
Nf |
N - Nf |
N |
|
nf is the number of flagged genes in the category, n is the total number of genes in the category, Nf is the number of flagged genes on the microarray, and N is the total number of genes on the microarray. All numbers are those obtained after dereplicating multiple instances of the same gene. | |||
Zeeberg et al. Genome Biology 2003 4:R28 doi:10.1186/gb-2003-4-4-r28 |
|||