Research
Phylogenetically and spatially conserved word pairs associated with gene-expression changes in yeasts
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* Corresponding author: Michael B Eisen mbeisen@lbl.gov
1 Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
2 Graduate Group in Biophysics, University of California, Berkeley, CA 94720, USA
3 Whitehead/MIT Center for Genome Research, Department of Computer Science, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
4 Whitehead/MIT Center for Genome Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
5 Department of Genome Sciences, Life Sciences Division, Ernest Orlando Lawrence Berkeley National Lab, 1 Cyclotron Road, Berkeley, CA 94720, USA
6 Center for Integrative Genomics and Division of Genetics and Development, Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Genome Biology 2003, 4:R43 doi:10.1186/gb-2003-4-7-r43
Published: 26 June 2003Additional files
Additional data file 1:
A tab-delimited text list of 989 identified conserved word-pair templates
Format: TXT Size: 84KB Download file
Additional data file 2:
A figure that shows that incorporation of conservation and word pairs provided more informative average expression profiles
Format: PDF Size: 24KB Download file
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Additional data file 3:
A figure that shows that regression models using conserved word pairs represented better fits to genome-wide expression data
Format: PDF Size: 16KB Download file
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Additional data file 4:
The underlying data for Figure 4 that show associations between gene groups that share a conserved word-pair template with gene-expression changes
Format: ZIP Size: 42KB Download file