Table 1 |
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|
Novel S. cerevisiae ORFs identified by homology and synteny to A. gossypii ORFs |
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|
A. gossypii ORF |
Novel S. cerevisiae ORF(s) |
% Similarity |
Homologs* |
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|
|
|
|
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|
Name |
Size |
Name(s) |
Size(s) |
Hemiascomycetes |
C. albicans |
S. pombe |
N. crassa |
|
|
|
||||||||
|
AGL322W |
57 |
YBL039W-A |
59 |
53.70 |
x |
|||
|
ADL343C |
99 |
YBR111W-A |
98 |
65.28 |
x |
x |
||
|
AAL005W |
72 |
YCL005W-A |
73 |
79.17 |
x |
x |
x |
|
|
AFR743C-A |
132 |
YCL058W-A |
132 |
45.00 |
x |
|||
|
AER271W |
81 |
YCR075W-A/YNR034W-A† |
75/99 |
44.00/46.15 |
x |
|||
|
ACL158W |
95 |
YDL160C-A |
80 |
55.70 |
x |
|||
|
AGR097W-A |
66 |
YER180C-A |
85 |
83.70 |
x |
|||
|
AFR298C |
73 |
YIL156W-B |
73 |
71.23 |
x |
x |
x |
|
|
AFL216C |
49 |
YJL127C-B |
52 |
61.22 |
x |
x |
||
|
AAL130W |
93 |
YJR005C-A/YGR169C-A† |
92/93 |
74.44/50.82 |
x |
x |
||
|
ABR148C-A |
117 |
YJR112W-A |
109 |
56.44 |
x |
x |
x |
|
|
ABR099W-A |
73 |
YKL068W-A |
78 |
33.33 |
x |
|||
|
AFR204W |
68 |
YKL138C-A |
68 |
57.35 |
x |
|||
|
AFR289W |
81 |
YKR095W-A |
83 |
58.75 |
x |
x |
x |
|
|
ADL036W-A |
75 |
YLR307C-A |
87 |
50.00 |
||||
|
AFL165W |
94 |
YMR194C-B |
73 |
51.47 |
x |
x |
x |
x |
|
ADL210W |
72 |
YNL024C-A |
72 |
81.94 |
x |
x |
x |
x |
|
AFR059W |
84 |
YNL138W-A |
85 |
52.38 |
x |
|||
|
AAR108W-A |
70 |
YOR020W-A |
90 |
35.71 |
x |
x |
||
|
ABR192C-A |
71 |
YPL096C-A |
68 |
45.59 |
x |
|||
|
AFL069C |
58 |
YPL189C-A |
68 |
69.64 |
x |
x |
||
|
ACR178C |
65 |
YPR036W-A |
67 |
51.06 |
x |
x |
||
|
AEL262C-A |
86 |
YPR170W-B |
85 |
85.88 |
x |
x |
x |
|
|
|
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|
*x indicates that a homolog to the novel ORF was found in the hemiascomycete, C. albicans, S. pombe or N. crassa databases. †Novel cases of gene duplication with homology to a single A. gossypii gene, remnant from the postulated genome doubling in the S. cerevisiae lineage [12,13]. |
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|
Brachat et al. Genome Biology 2003 4:R45 doi:10.1186/gb-2003-4-7-r45 |
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