Table 1

Novel S. cerevisiae ORFs identified by homology and synteny to A. gossypii ORFs
A. gossypii ORF
 Novel S. cerevisiae ORF(s)
 % Similarity
 Homologs*

Name
 Size
 Name(s)
 Size(s)
Hemiascomycetes
 C. albicans
 S. pombe
 N. crassa
AGL322W
 57
 YBL039W-A
 59
 53.70
 x


ADL343C
 99
 YBR111W-A
 98
 65.28
 x
 x

AAL005W
 72
 YCL005W-A
 73
 79.17
 x
 x
x
AFR743C-A
 132
 YCL058W-A
 132
 45.00
 x


AER271W
 81
 YCR075W-A/YNR034W-A†
 75/99
 44.00/46.15
 x


ACL158W
 95
 YDL160C-A
 80
 55.70
 x


AGR097W-A
 66
 YER180C-A
 85
 83.70
 x


AFR298C
 73
 YIL156W-B
 73
 71.23
 x
 x
 x
AFL216C
 49
 YJL127C-B
 52
 61.22
 x
 x

AAL130W
 93
 YJR005C-A/YGR169C-A†
 92/93
 74.44/50.82
 x
 x

ABR148C-A
 117
 YJR112W-A
 109
 56.44
 x
 x
x
ABR099W-A
 73
 YKL068W-A
 78
 33.33
 x


AFR204W
 68
 YKL138C-A
 68
 57.35
 x


AFR289W
 81
 YKR095W-A
 83
 58.75
 x
 x
 x
ADL036W-A
 75
 YLR307C-A
 87
 50.00



AFL165W
 94
 YMR194C-B
 73
 51.47
 x
 x
 x
 x
ADL210W
 72
 YNL024C-A
 72
 81.94
 x
 x
 x
 x
AFR059W
 84
 YNL138W-A
 85
 52.38
 x


AAR108W-A
 70
 YOR020W-A
 90
 35.71
 x
 x

ABR192C-A
 71
 YPL096C-A
 68
 45.59
 x


AFL069C
 58
 YPL189C-A
 68
 69.64
 x
 x

ACR178C
 65
 YPR036W-A
 67
 51.06
 x
 x

AEL262C-A
 86
 YPR170W-B
 85
 85.88
 x
 x
x

*x indicates that a homolog to the novel ORF was found in the hemiascomycete, C. albicans, S. pombe or N. crassa databases. †Novel cases of gene duplication with homology to a single A. gossypii gene, remnant from the postulated genome doubling in the S. cerevisiae lineage [12,13].

Brachat et al. Genome Biology 2003 4:R45   doi:10.1186/gb-2003-4-7-r45

Open Data