Table 1

Novel S. cerevisiae ORFs identified by homology and synteny to A. gossypii ORFs

A. gossypii ORF

Novel S. cerevisiae ORF(s)

% Similarity

Homologs*




Name

Size

Name(s)

Size(s)

Hemiascomycetes

C. albicans

S. pombe

N. crassa


AGL322W

57

YBL039W-A

59

53.70

x

ADL343C

99

YBR111W-A

98

65.28

x

x

AAL005W

72

YCL005W-A

73

79.17

x

x

x

AFR743C-A

132

YCL058W-A

132

45.00

x

AER271W

81

YCR075W-A/YNR034W-A

75/99

44.00/46.15

x

ACL158W

95

YDL160C-A

80

55.70

x

AGR097W-A

66

YER180C-A

85

83.70

x

AFR298C

73

YIL156W-B

73

71.23

x

x

x

AFL216C

49

YJL127C-B

52

61.22

x

x

AAL130W

93

YJR005C-A/YGR169C-A

92/93

74.44/50.82

x

x

ABR148C-A

117

YJR112W-A

109

56.44

x

x

x

ABR099W-A

73

YKL068W-A

78

33.33

x

AFR204W

68

YKL138C-A

68

57.35

x

AFR289W

81

YKR095W-A

83

58.75

x

x

x

ADL036W-A

75

YLR307C-A

87

50.00

AFL165W

94

YMR194C-B

73

51.47

x

x

x

x

ADL210W

72

YNL024C-A

72

81.94

x

x

x

x

AFR059W

84

YNL138W-A

85

52.38

x

AAR108W-A

70

YOR020W-A

90

35.71

x

x

ABR192C-A

71

YPL096C-A

68

45.59

x

AFL069C

58

YPL189C-A

68

69.64

x

x

ACR178C

65

YPR036W-A

67

51.06

x

x

AEL262C-A

86

YPR170W-B

85

85.88

x

x

x


*x indicates that a homolog to the novel ORF was found in the hemiascomycete, C. albicans, S. pombe or N. crassa databases. Novel cases of gene duplication with homology to a single A. gossypii gene, remnant from the postulated genome doubling in the S. cerevisiae lineage [12,13].

Brachat et al. Genome Biology 2003 4:R45   doi:10.1186/gb-2003-4-7-r45

Open Data