|
Kishino-Hasegawa test for the analyzed cases of apparent xenologous gene displacement in situ |
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| Tree* |
Diff lnL† |
S.E.‡ |
RELL-BP§ |
|
|
|||
| L19 original |
0.0 |
ML |
0.8004 |
| 1R2 |
-12.6 |
7.7 |
0.0480 |
| 3R4 |
-6.6 |
6.6 |
0.1516 |
| RuvB original |
0.00 |
ML |
0.9631 |
| 1R2 |
-27.1 |
15.4 |
0.0369 |
| UppS original |
0.00 |
ML |
0.9883 |
| 1R2 |
-29.3 |
12.8 |
0.0117 |
| NuoH original |
0.00 |
ML |
0.8336 |
| 1R2 |
-7.4 |
7.9 |
0.1664 |
| RfbA original |
0.00 |
ML |
1.0000 |
| 1R2 |
-151.1 |
25.0 |
0.0000 |
| RfbD original |
0.00 |
ML |
0.9005 |
| 1R2 |
-17.0 |
13.3 |
0.0995 |
| LeuA original |
0.00 |
ML |
1.0000 |
| 1R2 |
-150.2 |
25.8 |
0.0000 |
| 3R4 |
-418.6 |
31.5 |
0.0000 |
| 5R6 |
-245.0 |
27.8 |
0.0000 |
| LeuB original |
0.00 |
ML |
0.9847 |
| 1R2 |
-52.9 |
18.1 |
0.0007 |
| 3R4 |
-31.7 |
14.9 |
0.0146 |
| LeuC original |
0.00 |
ML |
1.0000 |
| 1R2 |
-302.7 |
31.6 |
0.0000 |
| 3R4 |
-439.1 |
32.1 |
0.0000 |
| LeuD original |
0.00 |
ML |
1.0000 |
| 1R2 |
-66.6 |
17.2 |
0.0000 |
| 3R4 |
-76.7 |
16.8 |
0.0000 |
|
*The numbers refer to local rearrangements of the tree as indicated on the corresponding figures. †Difference of the Log-likelihoods relative to the best tree. ‡Standard error of Diff lnL. §Bootstrap probability of the given tree calculated using the RELL method (Resampling of Estimated Log-likelihoods). | |||
Omelchenko et al. Genome Biology 2003 4:R55 doi:10.1186/gb-2003-4-9-r55 |
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