Table 4 |
||
|
Summary of the number of functional linkages between M. tuberculosis genes established by each of the four prediction methods of this paper, alone and in combination |
||
| Method(s) |
Functional links |
Proteins |
|
|
||
| One method |
||
| Rosetta Stone |
20,714 |
1,279 |
| Gene Neighbor |
15,550 |
1,658 |
| Phylogenetic Profiles |
67,684 |
1,815 |
| Operon (≤100 bp) |
8,468 |
2,870 |
| Two methods |
||
| 100 bp Operon and RS |
414 |
|
| 100 bp Operon and PP |
632 |
|
| 100 bp Operon and GN |
1516 |
|
| Three methods |
||
| 100 bp Operon, RS and PP |
186 |
|
| 100 bp Operon, RS and GN |
246 |
|
| 100 bp Operon, PP and GN |
472 |
|
| All four methods |
||
| 100 bp Operon, PP, GN and RS |
138 |
|
|
|
||
|
PP, Phylogenetic Profile method; GN, conserved Gene Neighbor method; RS, Rosetta Stone method. |
||
|
Strong et al. Genome Biology 2003 4:R59 doi:10.1186/gb-2003-4-9-r59 |
||
