Table 3

Distribution of DAVID's features among related programs

Exploratory tools
 Annotation tools


FatiGO
 GoMiner
 MAPPFinder
 ENSMART
 GeneLynx
 MatchMiner
 Resourcerer
 Source
DAVID input type







Affymetrix probe set
 -
 -
 -
 +*
 -
 +*
 +
 -
GenBank
 +
 -
 +
 +
 +
 +
 +
 +
LocusLink
 -
 -
 -
 +
 +
 -
 -
 +
RefSeq
 -
 -
 -
 +
 +
 +
 -
 +
UniGene
 +
 -
 -
 -
 +
 +
 -
 +
Additional data input
 -
 -
 -
 -
 -
 -
 -
 -









DAVID annotation type







Affymetrix description
 -
 -
 -
 -
 -
 -
 -
 -
GenBank
 -
 -
 -
 +
 +
 +
 +
 +
GeneCards
 -
 +
 -
 -
 +
 -
 -
 +
GO
 +
 +
 +
 +
 +
 -
 -
 +
KEGG
 -
 +
 -
 -
 -
 -
 -
 -
LocusLink
 -
 +
 -
 +
 +
 -
 -
 +
OMIM
 -
 +
 -
 +
 -
 +
 -
 +
PFAM
 -
 -
 -
 +
 -
 -
 -
 -
RefSeq
 -
 +
 -
 +
 +
 +
 +
 +
Functional summaries
 -
 -
 -
 -
 +
 -
 -
 +
UniGene
 +
 +
 -
 -
 +
 +
 +
 +









DAVID functionality







Annotation tables
 -
 +
 -
 +
 +
 +
 +
 +
Subset traversal of GO hierarchy
 -
 -
 -
 -
 -
 -
 -
 -
Hyperlinked cross-references
 -
 +
 -
 -
 -
 +
 +
 -
Summary graphics
 +
 +
 +
 -
 -
 -
 -
 -
View GO terms in tree view
 +
 +
 +
 -
 -
 -
 -
 +
View GO terms in DAG view
 -
 +
 -
 -
 +
 -
 -
 -
View genes within pathways
 -
 -
 +
 -
 -
 -
 -
 -
Web-accessible
 +
 -
 -
 +
 +
 +
 +
 +









DAVID species







Human
 +
 +
 +
 +
 +
 +
 +
 +
Mouse
 +
 -
 +
 +
 +
 -
 +
 +
Rat
 -
 -
 -
 +
 -
 -
 -
 +
Fly
 +
 -
 -
 +
 -
 -
 -
 -

+ possesses this feature; - does not possess this feature; +* does not include HuFL6800 GeneChip.

Dennis et al. Genome Biology 2003 4:R60   doi:10.1186/gb-2003-4-9-r60