Table 3

Distribution of DAVID's features among related programs

Exploratory tools

Annotation tools



FatiGO

GoMiner

MAPPFinder

ENSMART

GeneLynx

MatchMiner

Resourcerer

Source


DAVID input type


Affymetrix probe set

-

-

-

+*

-

+*

+

-

GenBank

+

-

+

+

+

+

+

+

LocusLink

-

-

-

+

+

-

-

+

RefSeq

-

-

-

+

+

+

-

+

UniGene

+

-

-

-

+

+

-

+

Additional data input

-

-

-

-

-

-

-

-

DAVID annotation type


Affymetrix description

-

-

-

-

-

-

-

-

GenBank

-

-

-

+

+

+

+

+

GeneCards

-

+

-

-

+

-

-

+

GO

+

+

+

+

+

-

-

+

KEGG

-

+

-

-

-

-

-

-

LocusLink

-

+

-

+

+

-

-

+

OMIM

-

+

-

+

-

+

-

+

PFAM

-

-

-

+

-

-

-

-

RefSeq

-

+

-

+

+

+

+

+

Functional summaries

-

-

-

-

+

-

-

+

UniGene

+

+

-

-

+

+

+

+

DAVID functionality


Annotation tables

-

+

-

+

+

+

+

+

Subset traversal of GO hierarchy

-

-

-

-

-

-

-

-

Hyperlinked cross-references

-

+

-

-

-

+

+

-

Summary graphics

+

+

+

-

-

-

-

-

View GO terms in tree view

+

+

+

-

-

-

-

+

View GO terms in DAG view

-

+

-

-

+

-

-

-

View genes within pathways

-

-

+

-

-

-

-

-

Web-accessible

+

-

-

+

+

+

+

+

DAVID species


Human

+

+

+

+

+

+

+

+

Mouse

+

-

+

+

+

-

+

+

Rat

-

-

-

+

-

-

-

+

Fly

+

-

-

+

-

-

-

-


+ possesses this feature; - does not possess this feature; +* does not include HuFL6800 GeneChip.

Dennis et al. Genome Biology 2003 4:R60   doi:10.1186/gb-2003-4-9-r60

Open Data