An integrated gene annotation and transcriptional profiling approach towards the full gene content of the Drosophila genome
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* Corresponding authors: M Vingron HeidelbergFlyArray@dkfz.de - F Sauer HeidelbergFlyArray@dkfz.de - JD Hoheisel HeidelbergFlyArray@dkfz.de - R Paro HeidelbergFlyArray@dkfz.de
- † Equal contributors
Genome Biology 2003, 5:R3 doi:10.1186/gb-2003-5-1-r3
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BioMed Central: 10 citations
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Research
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Research
High-resolution transcription atlas of the mitotic cell cycle in budding yeast Marina V Granovskaia, Lars J Jensen, Matthew E Ritchie, Joern Toedling, Ye Ning, Peer Bork, Wolfgang Huber, Lars M Steinmetz Genome Biology 2010, 11:R24 (1 March 2010) A high resolution strand-specific transcriptional atlas of the budding yeast mitotic cell cycle, including both mRNA and non-coding RNA profiles. |
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Research
Gene networks in Drosophila melanogaster: integrating experimental data to predict gene function James C Costello, Mehmet M Dalkilic, Scott M Beason, Jeff R Gehlhausen, Rupali Patwardhan, Sumit Middha, Brian D Eads, Justen R Andrews Genome Biology 2009, 10:R97 (16 September 2009) The first computational interaction network built from |
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Research article
Sebastian Kurscheid, Ala E Lew-Tabor, Manuel Rodriguez Valle, Anthea G Bruyeres, Vivienne J Doogan, Ulrike G Munderloh, Felix D Guerrero, Roberto A Barrero, Matthew I Bellgard BMC Molecular Biology 2009, 10:26 (26 March 2009) |
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Research article
Manuel Irimia, Jakob Rukov, David Penny, Scott Roy BMC Evolutionary Biology 2007, 7:188 (4 October 2007) |
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Method
Ramanuj DasGupta, Kent Nybakken, Matthew Booker, Bernard Mathey-Prevot, Foster Gonsalves, Binita Changkakoty, Norbert Perrimon Genome Biology 2007, 8:R203 (28 September 2007) A second generation dsRNA library was used to re-assess factors that influence the outcome of transcriptional reporter-based whole-genome RNAi screens for the Wnt/Wingless (wg) and Hedgehog (hh)-signaling pathways. |
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Methodology article
Systematic interpretation of microarray data using experiment annotations Kurt Fellenberg, Christian H Busold, Olaf Witt, Andrea Bauer, Boris Beckmann, Nicole C Hauser, Marcus Frohme, Stefan Winter, Jürgen Dippon, Jörg D Hoheisel BMC Genomics 2006, 7:319 (20 December 2006) |
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Research
Sex-specific expression of alternative transcripts in Drosophila Lauren M McIntyre, Lisa M Bono, Anne Genissel, Rick Westerman, Damion Junk, Marina Telonis-Scott, Larry Harshman, Marta L Wayne, Artyom Kopp, Sergey V Nuzhdin Genome Biology 2006, 7:R79 (25 August 2006) A genome-wide microarray analysis of sex-specific expression of alternative transcripts in Drosophila shows sexual dimorphism in transcript abundance for 53% of the genes. |
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Minireview
Canonical Wnt signaling: high-throughput RNAi widens the path Anthony MC Brown Genome Biology 2005, 6:231 (31 August 2005) Although Wnt signaling has been the subject of extensive genetic analysis in the past, some 200 genes have now been identified as candidate modulators of this pathway by a recent study using high-throughput RNAi screening. |
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Minireview
Brian Oliver, Benoit Leblanc Genome Biology 2003, 5:204 (22 December 2003) A recent study of the |