Genome Biology

official impact factor 6.89

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Antisense transcripts with rice full-length cDNAs

Naoki Osato, Hitomi Yamada, Kouji Satoh, Hisako Ooka, Makoto Yamamoto, Kohji Suzuki, Jun Kawai, Piero Carninci, Yasuhiro Ohtomo, Kazuo Murakami, Kenichi Matsubara, Shoshi Kikuchi and Yoshihide Hayashizaki*

Genome Biology 2003, 5:R5 doi:

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Research article   Open Access

Sense and antisense OsDof12 transcripts in rice

Dejun Li, Chunhua Yang, Xiaobing Li, Guobiao Ji, Lihuang Zhu BMC Molecular Biology 2008, 9:80 (17 September 2008)

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Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis

Hailing Jin, Vladimir Vacic, Thomas Girke, Stefano Lonardi, Jian-Kang Zhu BMC Molecular Biology 2008, 9:6 (14 January 2008)

Database   Open Access

antiCODE: a natural sense-antisense transcripts database

Yifei Yin, Yi Zhao, Jie Wang, Changning Liu, Shuguang Chen, Runsheng Chen, Haitao Zhao BMC Bioinformatics 2007, 8:319 (30 August 2007)

Research article   Open Access

Uncovering information on expression of natural antisense transcripts in Affymetrix MOE430 datasets

Sebastian Oeder, Joerg Mages, Paul Flicek, Roland Lang BMC Genomics 2007, 8:200 (28 June 2007)

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Prediction of trans-antisense transcripts in Arabidopsis thaliana

Huan Wang, Nam-Hai Chua, Xiu-Jie Wang Genome Biology 2006, 7:R92 (13 October 2006)

A genome-wide screen for trans-natural antisense transcripts in Arabidopsis thaliana suggests that antisense transcripts could be involved in complex regulatory networks in eukaryotes.

Research   Open Access

Transcriptome analysis of antigenic variation in Plasmodium falciparum - var silencing is not dependent on antisense RNA

Stuart A Ralph, Emmanuel Bischoff, Denise Mattei, Odile Sismeiro, Marie-Agnès Dillies, Ghislaine Guigon, Jean-Yves Coppee, Peter H David, Artur Scherf Genome Biology 2005, 6:R93 (31 October 2005)

A microarray analysis of Plasmodium falciparum selected to express different var genes suggests that antisense transcripts are not responsible for the transcriptional silencing of non-expressed var genes.

Research article   Open Access

Evidence for abundant transcription of non-coding regions in the Saccharomyces cerevisiae genome

Moshe Havilio, Erez Y Levanon, Galia Lerman, Martin Kupiec, Eli Eisenberg BMC Genomics 2005, 6:93 (16 June 2005)

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Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana

Xiu-Jie Wang, Terry Gaasterland, Nam-Hai Chua Genome Biology 2005, 6:R30 (15 March 2005)

A new computational method for predicting cis-encoded natural antisense transcripts (NATs) in Arabidopsis identified 1,340 potential NAT pairs. The expression of both sense and antisense transcripts of 957 NAT pairs was confirmed, and analysis of MPSS data suggested that for most pairs one of the two transcripts is predominantly expressed in a tissue-specific manner.