Genome Biology

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A comprehensive transcript index of the human genome generated using microarrays and computational approaches

Eric E Schadt1*, Stephen W Edwards1, Debraj GuhaThakurta1, Dan Holder2, Lisa Ying2, Vladimir Svetnik2, Amy Leonardson1, Kyle W Hart3, Archie Russell1, Guoya Li1, Guy Cavet1, John Castle1, Paul McDonagh4, Zhengyan Kan1, Ronghua Chen1, Andrew Kasarskis1, Mihai Margarint1, Ramon M Caceres1, Jason M Johnson1, Christopher D Armour1, Philip W Garrett-Engele1, Nicholas F Tsinoremas5 and Daniel D Shoemaker1*

Author Affiliations

1 Rosetta Inpharmatics LLC, 12040 115th Avenue NE, Kirkland, WA 98034, USA

2 Merck Research Laboratories, W42-213 Sumneytown Pike, POB 4, Westpoint, PA 19846, USA

3 Rally Scientific, 41 Fayette Street, Suite 1, Watertown, MA 02472, USA

4 Amgen Inc, 1201 Amgen Court W, Seattle, WA 98119, USA

5 The Scripps Research Institute, Jupiter, FL 33458, USA

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Genome Biology 2004, 5:R73 doi:10.1186/gb-2004-5-10-r73

Published: 23 September 2004

Additional files

Additional data file 1:

A complete list of 48,614 transcripts in the PTI that were represented on the set of predicted transcript arrays

Format: XLS Size: 5.1MB Download file

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Additional data file 2:

A complete list of 60 tissues and cell lines hybridized to the predicted transcript arrays

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Additional data file 3:

A list of six tissues and cell lines hybridized to the chromosome 20 genomic tiling arrays

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Additional data file 4:

The eight tissues and cell lines hybridized to the chromosome 22 genomic tiling arrays

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Additional data file 5:

A comparison of EVG predictions with RefSeq sequencesP

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