Email updates

Keep up to date with the latest news and content from Genome Biology and BioMed Central.

Open Access Research

Insertion bias and purifying selection of retrotransposons in the Arabidopsis thaliana genome

Vini Pereira

Author Affiliations

Imperial College London, Silwood Park Campus, Buckhurst Road, Ascot, Berkshire SL5 7PY, UK

Genome Biology 2004, 5:R79  doi:10.1186/gb-2004-5-10-r79

Published: 29 September 2004

Additional files

Additional data file 1:

The entire dataset of chromosomal coordinates and ages of complete LTR-retrotransposons in A. thaliana

Format: CSV Size: 56KB Download file

Open Data

Additional data file 2:

A file describing the data fields in Additional data file 1

Format: READ Size: 2KB Download file

Open Data

Additional data file 3:

The entire dataset of chromosomal coordinates of solo-LTRs in A. thaliana

Format: CSV Size: 64KB Download file

Open Data

Additional data file 4:

A file describing the data fields in Additional data file 3

Format: READ Size: 1KB Download file

Open Data

Additional data file 5:

The Perl script LTR_MINER, used to de-fragment sequence similarity hits to LTR-retrotransposons, and identify complete and solo-LTR elements

Format: PL Size: 73KB Download file

Open Data

Additional data file 6:

A file describing the utility and usage of the Perl script in Additional data file 5

Format: READ Size: 2KB Download file

Open Data

Additional data file 7:

The Perl script used in conjunction with LTR_MINER, used to divide long sequences into smaller chunks labeled by their coordinate range

Format: PL Size: 5KB Download file

Open Data

Additional data file 8:

A file describing the utility and usage of the Perl script in Additional data file 7

Format: READ Size: 1KB Download file

Open Data