Table 2 |
||||
|
Gene sequences corresponding to isochore peaks shown in Figure 3 |
||||
|
Peak |
Size (kb) |
% G+C |
B. subtilis orthologs |
Annotation |
|
|
||||
|
1 |
3.2 |
28 |
No |
ABC transporter, conserved hypothetical, and hypothetical genes |
|
2 |
3.6 |
38 |
No |
Conserved hypothetical and hypothetical genes |
|
3 |
2.1 |
37 |
No |
Conserved hypothetical and hypothetical genes |
|
4 |
2.8 |
37 |
No |
Hypothetical genes |
|
5 |
2.7 |
37 |
No |
Phosphotriesterase, conserved hypothetical genes |
|
6 |
7.4 |
37 |
No |
Type I restriction-modification system |
|
7 |
3.5 |
38 |
No |
Hypothetical genes |
|
8 |
8.4 |
38 |
Partial |
yybO, pucR, pucH, yurH, ycbE, yjfA, rapG, carbamate kinase, conserved hypothetical and hypothetical genes |
|
9 |
10.1 |
36 |
No |
SPP-1 like phage, conserved hypothetical and hypothetical genes |
|
10 |
4.8 |
37 |
Yes |
Hypothetical genes |
|
11 |
3.0 |
33 |
No |
Conserved hypothetical and hypothetical genes |
|
12 |
4.3 |
34 |
No |
Conserved hypothetical and hypothetical genes |
|
13 |
2.2 |
34 |
No |
Conserved hypothetical and hypothetical genes |
|
14 |
5.4 |
36 |
Partial |
Conserved hypothetical and hypothetical genes |
|
15 |
4.4 |
35 |
No |
Conserved hypothetical and hypothetical genes |
|
16 |
4.6 |
33 |
No |
ABC transporter and hypothetical genes |
|
17 |
3.5 |
35 |
Partial |
comP, comX, comQ, and IS3Bli1 |
|
18 |
6.8 |
37 |
No |
IS3Bli1, conserved hypothetical and hypothetical genes |
|
19 |
3.8 |
38 |
No |
Phage w-105-like genes |
|
20 |
6.8 |
35 |
Yes |
tagG and tagF genes |
|
21 |
3.2 |
34 |
No |
Conserved hypothetical genes |
|
22 |
1.7 |
34 |
No |
Conserved hypothetical genes |
|
23 |
1.6 |
37 |
No |
Hypothetical genes |
|
24 |
16.2 |
35 |
No |
Type I restriction-modification system, conserved hypothetical and hypothetical genes |
|
25 |
3.3 |
62 |
No |
Hypothetical gene |
|
|
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|
Rey et al. Genome Biology 2004 5:r77 doi:10.1186/gb-2004-5-10-r77 |
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