Table 2 |
||||
|
Candidate binding sites for the predicted lysine-specific regulator LysX* |
||||
|
Gene |
Site |
Position† |
Score |
|
|
|
||||
|
Desulfovibrio vulgaris |
||||
|
208064 |
lysX*-lysA |
GTGGTACTAATcAGTACCAC |
-277 |
6.82 |
|
206613 |
~mviN* |
GTGGTtCTttgTAGTACtAC |
-135 |
5.45 |
|
Desulfovibrio desulfuricans G20 |
||||
|
394240 |
lysX*-lysA |
GTaGTACTAAaTAGTACCAC |
-43 |
6.70 |
|
393213 |
lysW* |
GgcGTtCTAAagAGTACCAC |
-145 |
5.88 |
|
394397 |
~mviN* |
GTaGTtgTgATaAGaAaCAC |
-275 |
4.70 |
|
|
||||
|
†Position relative to the start of translation. *New name introduced in this study. Lower case letters represent positions that do not conform to the consensus sequence. |
||||
|
Rodionov et al. Genome Biology 2004 5:R90 doi:10.1186/gb-2004-5-11-r90 |
||||
