Table 6

Candidate binding sites for the molybdate regulator ModE

Gene

Operon

Function

Site

Position*

Score


Geobacter sulfurreducens PCA

383279

modDABC

Molybdate transport

ATCGTTATgTcaTgAAggtTATAGCGtT

-158

5.16

Desulfovibrio vulgaris

209110

modA

Molybdate transport

CGGTCACG-[N14]-gGTGACCG

-131

5.56

209114

modBC

Molybdate transport

CGGTCACc-[N14]-CGTGACCa

-218

5.38

Desulfovibrio desulfuricans

393254

modAB2-393256

Molybdate transport, ?

CtGTCACG-[N14]-CGTGACCG

-183

5.56

393587

modAB1-modC

Molybdate transport

ttGTCACG-[N14]-CGTGACCG

-119

5.38


*Positionrelative to the start of translation. Lower case letters represent positions that do not conform to the consensus sequence.

Rodionov et al. Genome Biology 2004 5:R90   doi:10.1186/gb-2004-5-11-r90

Open Data