Table 1

InterAct classes that contain more than one gene
CN model
Number of genes
 InterAct class






C
 N
 CN
 C+N
No effect
1,167
 0
 0
 0
 0




C-only
 Inductive
 1,011
 1
 0
 1
 1

Repressive
 596
 -1
 0
 -1
 -1




N-only
 Repressive
 4
 0
 -1
 -1
 -1

C dominates
 187
 1
 -1
 1
 1


156
 -1
 1
 -1
 -1


142
 2
 1
 2
 2


140
 -2
 -1
 -2
 -2




Model 1 (independent)
 N dominates
 3
 -1
 1
 1
 1

Equal effect
 145
 -1
 -1
 -1
 -1


63
 1
 1
 1
 1

Antagonistic
 6
 2
 -1
 1
 1


3
 -2
 1
 -1
 -1

Inductive
 4
 2
 1
 3
 3


3
 1
 1
 2
 2

Repressive
 3
 -1
 -1
 -2
 -2


2
 -2
 -1
 -3
 -3








Model 2 (dependent)
 Inductive
 7
 0
 0
 1
 0

Repressive
 2
 0
 0
 -1
 0




Model 3 (dependent/ independent)
 CN-enhanced
 92
 1
 0
 2
 1


25
 2
 1
 3
 2


13
 -1
 -1
 -1
 -2


11
 -2
 -1
 -2
 -3


8
 2
 -1
 2
 1


8
 1
 -1
 2
 1


4
 0
 -1
 0
 -1


3
 0
 -1
 1
 -1


2
 2
 1
 4
 3


2
 -3
 -1
 -2
 -3





CN-suppressed
 46
 -2
 1
 -2
 -1


17
 -1
 1
 -1
 0


9
 -1
 2
 -1
 1


9
 -1
 0
 -2
 -1


9
 1
 1
 1
 2


8
 -1
 1
 -1
 1


6
 0
 1
 0
 1


6
 2
 0
 1
 2


3
 2
 1
 2
 3


2
 1
 1
 -1
 1


2
 -1
 1
 0
 1


2
 1
 2
 1
 3


2
 1
 0
 0
 1


2
 1
 -1
 -1
 1


2
 0
 1
 -1
 1

Palenchar et al. Genome Biology 2004 5:R91   doi:10.1186/gb-2004-5-11-r91

Open Data