Open Access Method

Sparse graphical Gaussian modeling of the isoprenoid gene network in Arabidopsis thaliana

Anja Wille1,2,3*, Philip Zimmermann1,4*, Eva Vranová1,4, Andreas Fürholz1,4, Oliver Laule1,4, Stefan Bleuler1,5, Lars Hennig1,4, Amela Prelić1,5, Peter von Rohr1,6, Lothar Thiele1,5, Eckart Zitzler1,5, Wilhelm Gruissem1,4 and Peter Bühlmann1,3

1 Reverse Engineering Group, Swiss Federal Institute of Technology (ETH), Zurich

2 Colab, ETH, Zurich 8092, Switzerland

3 Seminar for Statistics, ETH, Zurich 8092, Switzerland

4 Institute for Plant Sciences and Functional Genomics Center Zurich, ETH, Zurich 8092, Switzerland

5 Computer Engineering and Networks Laboratory, ETH, Zurich 8092

6 Institute of Computational Science, ETH, Zurich 8092, Switzerland

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Genome Biology 2004, 5:R92 doi:10.1186/gb-2004-5-11-r92

Published: 25 October 2004

Additional files

Additional data file 1:

The gene expression values of the isoprenoid genes

Format: TXT Size: 32KB Download file

Open Data

Additional data file 2:

The gene expression values of the 795 genes from other pathways

Format: TXT Size: 618KB Download file

Open Data

Additional data file 3:

A more detailed description of the microarray data (such as experimental conditions, hybridization and standardization)

Format: PDF Size: 36KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data

Additional data file 4:

The correlation pattern of the 40 isoprenoid genes.

Format: PDF Size: 107KB Download file

This file can be viewed with: Adobe Acrobat Reader

Open Data