Table 1

Examples of class relevance evaluation
Original class annotations
 Most relevant term among class annotations
 Associated probability
 Number of proteins in the class
 Number of class proteins annotated for the term
 Number of proteins annotated for the term in the reference set
Conjugation with cellular fusion; perception of abiotic stimulus; cell surface receptor linked signal transduction; sensory perception; response to pheromone during conjugation with cellular fusion
 Conjugation with cellular fusion
 3.85E-09
 11
 8
 32
RNA metabolism
 RNA metabolism
 2.76E-09
 32
 17
 70
Cell cycle
 Cell cycle
 0.07383
 6
 3
 115

The second and third columns are the results of the GO-Stats program, whereas all other columns are the results of a PRODISTIN analysis (see text for details).

Martin et al. Genome Biology 2004 5:R101   doi:10.1186/gb-2004-5-12-r101

Open Data