Table 4 |
||||||||
|
Alternative splicing in splicing-related genes |
||||||||
| Genes |
AltA |
AtlD |
AltP |
ExonS |
IntronR |
Overall |
Ratio |
|
|
|
||||||||
| snRNP proteins |
91 |
6 |
3 |
1 |
3 |
11 |
22 |
23.2% |
| Splicing factors |
109 |
14 |
5 |
0 |
11 |
21 |
38 |
34.9% |
| Splicing regulator |
60 |
8 |
4 |
2 |
1 |
12 |
20 |
33.3% |
| Total |
260 |
28 |
12 |
3 |
15 |
44 |
80 |
30.8% |
|
|
||||||||
|
The column entries are the numbers of genes in which the respective alternative splicing events can occur. AltA, alternative acceptor site; AltD, alternative donor site; AltP, alternative intron position (both acceptor and donor sites are different); ExonS, exon skipping; IntronR, intron retention. The Overall and Ratio columns give the number and fraction of genes with any type of alternative splicing, respectively. |
||||||||
|
Wang and Brendel Genome Biology 2004 5:R102 doi:10.1186/gb-2004-5-12-r102 |
||||||||
