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Genome-wide investigation of light and carbon signaling interactions in Arabidopsis

Karen E Thum, Michael J Shin, Peter M Palenchar, Andrei Kouranov and Gloria M Coruzzi*

Genome Biology 2004, 5:R10 doi:10.1186/gb-2004-5-2-r10

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Research article   Open Access

Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance

Fanny Ramel, Cécile Sulmon, Francisco Cabello-Hurtado, Ludivine Taconnat, Marie-Laure Martin-Magniette, Jean-Pierre Renou, Abdelhak El Amrani, Ivan Couée, Gwenola Gouesbet BMC Genomics 2007, 8:450 (5 December 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research   Open Access

Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis

Rodrigo A Gutiérrez, Laurence V Lejay, Alexis Dean, Francesca Chiaromonte, Dennis E Shasha, Gloria M Coruzzi Genome Biology 2007, 8:R7 (11 January 2007)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central | F1000 Biology |  Editor’s summary

Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis and indicate that regulation by carbon/nitrogen metabolites occurs at multiple levels.

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Genome-wide patterns of carbon and nitrogen regulation of gene expression validate the combined carbon and nitrogen (CN)-signaling hypothesis in plants

Peter M Palenchar, Andrei Kouranov, Laurence V Lejay, Gloria M Coruzzi Genome Biology 2004, 5:R91 (29 October 2004)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central |  Editor’s summary

Microarray analysis and the 'InterAct class' method were used to study interactions between carbon and nitrogen signaling in Arabidopsis.

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Interactions between light and carbon signaling pathways in Arabidopsis

José L Reyes, Nam-Hai Chua Genome Biology 2004, 5:213 (27 February 2004)

Abstract | Full text | PDF | PubMed |  Editor’s summary

A new report has examined the interactions between the light and carbon signaling pathways on a genomewide scale in Arabidopsis.

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