In silico identification and experimental validation of PmrAB targets in Salmonella typhimurium by regulatory motif detection
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* Corresponding author: Kathleen Marchal Kathleen.Marchal@esat.kuleuven.ac.be
Genome Biology 2004, 5:R9 doi:10.1186/gb-2004-5-2-r9
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BioMed Central: 4 citations
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Research article
In silico identification of NF-kappaB-regulated genes in pancreatic beta-cells Najib Naamane, Jacques van Helden, Decio L Eizirik BMC Bioinformatics 2007, 8:55 (15 February 2007) |
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Method
Inferring transcriptional modules from ChIP-chip, motif and microarray data Karen Lemmens, Thomas Dhollander, Tijl De Bie, Pieter Monsieurs, Kristof Engelen, Bart Smets, Joris Winderickx, Bart De Moor, Kathleen Marchal Genome Biology 2006, 7:R37 (5 May 2006) ReMoDiscovery, a module discovery algorithm and software that uses ChIP-chip data, motif information and gene-expression profiles, is presented. |