Local alignments of the most promising targets. Examples of local alignments obtained by phylogenetic footprinting of known PmrAB targets and of some promising potential targets. Known motifs or (putative) PmrA motifs are indicated by a box. (a) yfbE (pmrH); (b) yjdB (pmrC); (c) ugd; (d) yibD; (e) ybjG (mig-13); (f) STM1269 (aroQ); (g) sseJ.
Marchal et al. Genome Biology 2004 5:R9 doi:10.1186/gb-2004-5-2-r9