Table 3

Known RTs used for comparison in phylogenies

Name

Name of retrovirus

Accession number/citation

Host genus


GALV

Gibbon ape leukemia virus

AAA46810

Hylobates

PERV

Porcine endogenous retrovirus ERV-PK15

AF038601

Sus

BLV

Bovine Leukemia Virus

P03361

Bos

HERV-K

Human endogenous retrovirus K

P10266

Homo

HBCA*

Human breast cancer associated

AAG18012

Homo

HERV-L

Human endogenous retrovirus L

Z72519

Homo

GH_H18*

Golden hamster intracisternal A-particle H18

GNHYIH

Mesocricetus

FeLV

Feline leukemia virus

L06140

Felis

RERV

Rabbit endogenous retrovirus

AAM81191

Oryctolagus

GH-G18*

Golden hamster intracisternal type-A

P04026

Cricetus

SRV-1

Simian SRV-1 type D retrovirus

M11841

Macaca

MPMV

Mason-Pfizer Monkey Virus

GNLJMP

Macaca

MuLV

Moloney murine leukemia virus

AF033811

Mus

MuERV-L

Murine endogenous retrovirus ERV-L

T29097

Mus

MusD

Murine type D-like endogenous retrovirus MusD1

AF246632

Mus

HERV-C

Human endogenous retrovirus type C oncovirus

AAA73090

Homo

Phasco*

Koala type C endogenous virus

AAF15098

Phascolarctos

MDEV*

M. dunni endogenous virus

AAC31805

Mus

MMTV

Mouse mammary tumor virus

NC_001503

Mus

MmERV

M. musculus endogenous retrovirus

[13]

Mus


*Name used only in this study.

McCarthy and McDonald Genome Biology 2004 5:R14  

Open Data