Table 1 |
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List of QuintOPs that support the indicated tree topology with bootstrap support above 65% |
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Function |
Supporting hypothesis |
Bootstrap support |
|
|
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Undecaprenyl diphosphate synthase homologs |
Tree 11 [15] |
81 |
|
Seryl-tRNA synthetase |
Tree 11 [15] |
100 |
|
Arginyl-tRNA synthetase homologs |
Tree 11 [15] |
67 |
|
Succinyl-CoA synthetase, beta subunit |
Tree 11 [15] |
96 |
|
Signal recognition particle, subunit SRP54 |
Tree 11 [15] |
68 |
|
Nicotinate-nucleotide pyrophosphorylase |
Tree 11 [15] |
77 |
|
Anthranilate phosphoribosyltransferase |
Tree 11 [15] |
70 |
|
Glu-tRNA amidotransferase, subunit A homologs |
Tree 11 [15] |
69 |
|
Phenylalanyl-tRNA synthetase alpha subunit |
Tree 11 [15] |
99 |
|
Adenylosuccinate lyase |
Tree 11 [15] |
75 |
|
Aspartate aminotransferase |
Tree 12 [16] |
92 |
|
Carbamoyl-phosphate synthase, small subunit |
Tree 12 [16] |
83 |
|
Ketol-acid reductoisomerase homologs |
Tree 12 [16] |
72 |
|
Dihydroxy-acid dehydratase |
Tree 12 [16] |
100 |
|
Homoserine dehydrogenase |
Tree 12 [16] |
82 |
|
Histidinol-phosphate aminotransferase |
Tree 12 [16] |
66 |
|
NH3-dependent NAD+ synthetase |
Tree 9: genes of mitochondrial origin |
67 |
|
Argininosuccinate synthetase |
Tree 9: genes of mitochondrial origin |
95 |
|
Carbamoyl-phosphate synthase large subunit |
Tree 2 [20] |
91 |
|
Phosphoglycerate kinase |
Tree 4 |
79 |
|
Hypothetical protein |
Tree 4 |
100 |
|
Translation initiation factor eIF-2B homologs |
Tree 4 |
67 |
|
Argininosuccinate lyase |
Tree 4 |
75 |
|
Glutamate synthase |
Tree 4 |
80 |
|
Phosphoribosylformylglycinamidine synthase |
Tree 15 |
73 |
|
Ribosomal protein S3 homologs |
Tree 15 |
71 |
|
|
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Tree numbers correspond to the designations in used in Figures 7 and 8. |
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Zhaxybayeva et al. Genome Biology 2004 5:R20 doi:10.1186/gb-2004-5-3-r20 |
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