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Paper report

Articles selected by Faculty of 1000: proteomics of PH domains; machine-learning prediction of RNA-binding proteins; coated vesicle proteomics; classifying protein domain combinations; amino acid usage within proteomes

Genome Biology 2004, 5:321  doi:10.1186/gb-2004-5-4-321

The electronic version of this article is the complete one and can be found online at: http://genomebiology.com/2004/5/4/321/


Published:24 March 2004

© 2004 BioMed Central Ltd

Proteomics of PH domains

Genome-Wide Analysis of Membrane Targeting by S. cerevisiae Pleckstrin Homology Domains. Yu JW, Mendrola JM, Audhya A, Singh S, Keleti D, DeWald DB, Murray D, Emr SD, Lemmon MA. Mol Cell 2004, 13:677-688.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2004-5-4-321.asp#Yu webcite

Machine-learning prediction of RNA-binding proteins

Prediction of RNA-binding proteins from primary sequence by a support vector machine approach. Han LY, Cai CZ, Lo SL, Chung MC, Chen YZ. RNA 2004, 10:355-368.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2004-5-4-321.asp#Han webcite

Coated vesicle proteomics

Tandem MS analysis of brain clathrin-coated vesicles reveals their critical involvement in synaptic vesicle recycling. Blondeau F, Ritter B, Allaire PD, Wasiak S, Girard M, Hussain NK, Angers A, Legendre-Guillemin V, Roy L, Boismenu D, Kearney RE, Bell AW, Bergeron JJ, McPherson PS. Proc Natl Acad Sci USA 2004, March 8.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2004-5-4-321.asp#Blondeau webcite

Classifying protein domain combinations

Supra-domains: Evolutionary Units Larger than Single Protein Domains. Vogel C, Berzuini C, ... , Gough J, Teichmann SA. J Mol Biol 2004, 336:809-823.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2004-5-4-321.asp#Vogel webcite

Amino acid usage within proteomes

Intimate evolution of proteins. Proteome atomic content correlates with genome base composition. Baudouin-Cornu P, Schuerer K, Marlière P, Thomas D J Biol Chem 2004, 279:5421-5428.

For the Faculty of 1000 evaluation of this article please see: http://genomebiology.com/reports/F1000/gb-2004-5-4-321.asp#Baudouin-Cornu webcite

Genome Biologypaper reports
Genome Biology aims to highlight significant research articles newly published in other journals. From 2003, individual paper reports have been replaced by summaries of articles of interest to Genome Biology readers, taken from those highlighted by Faculty of 1000, a new online literature awareness tool published by BioMed Central. Faculty of 1000 systematically and comprehensively reviews the most interesting recent articles published in the biological sciences on the basis of recommendations of a faculty of over 1,400 selected leading researchers.