Enriching for direct regulatory targets in perturbed gene-expression profiles
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* Corresponding author: Stephanie W Ruby sruby@unm.edu
Genome Biology 2004, 5:R29 doi:
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Software review
A proof of the DBRF-MEGN method, an algorithm for deducing minimum equivalent gene networks Koji Kyoda, Kotaro Baba, Hiroaki Kitano, Shuichi Onami Source Code for Biology and Medicine 2011, 6:12 (24 June 2011) |
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Method
Indirect genomic effects on survival from gene expression data Egil Ferkingstad, Arnoldo Frigessi, Heidi Lyng Genome Biology 2008, 9:R58 (22 March 2008) A novel methodology is presented for detecting and quantifying indirect effects on cancer survival mediated through several target genes of transcription factors in cancer microarray data. |
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Research article
Lin Tang, Xiao Liu, Neil D Clarke BMC Genomics 2006, 7:215 (22 August 2006) |