Table 3

Genes involved in cell adhesion, lipogenesis and immune cell biology are modulated in white adipose tissue of RTH and iT3 mice

WAT

Clone ID and UniGene name

iT3

RTH

Cell Communication: cell adhesion

484261 : keratin complex 1, acidic, gene 13

NC

2.36↑

335736 : keratin complex 2, basic, gene 6a

NC

2.73↑

464060 : keratin complex 1, acidic, gene 19

NC

3.54↑

420709 : RIKEN cDNA 5730453H04 gene

NC

14.02↑

762299 : CEA-related cell adhesion molecule 1

NC

4.87↑

776133 : cadherin 1

NC

6.20↑

719965 : desmocollin 2

NC

2.79↑

761578 : desmoglein 2

1.49↓

3.30↑

Metabolism: lipogenesis

570675 : glycerol-3-phosphate dehydrogenase 1 (soluble)

2.33↓

1.49↓

352146 : ATP citrate lyase

4.17↓

2.94↓

439735 : Mus musculus, Similar to acetyl-coenzyme A carboxylase, clone 5151139

2.13↓

2.38↓

576881 : fatty acid synthase

2.94↓

3.13↓

693560 : ELOVL family member 6, elongation of long chain fatty acids (yeast)

2.38↓

2.22↓

578436 : phosphogluconate dehydrogenase

1.72↓

3.03↓

949810 : hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)

2.50↓

Response to external stimuli: immune cell biology

620268 : CD53 antigen

2.27↓

2.86↓

621878 : selectin, lymphocyte

1.33↓

2.44↓

618271 : histocompatibility 2, class II antigen A, beta 1

1.30↓

3.02↓

747378 : histocompatibility 2, class II antigen A, alpha

1.43↓

4.55↓

597433 : chemokine (C-X-C motif) ligand 13

1.27↓

2.44↓

637849 : histocompatibility 2, Q region locus 7

NC

2.27↓

748587 : histocompatibility 2, class II antigen E beta

NC

2.70↓

575397 : chemokine (C-C motif) ligand 6

NC

2.13↓

851752 : chemokine (C-C motif) ligand 22

NC

3.02↓

832043 : chemokine (C-C motif) ligand 19

NC

2.78↓

596470 : CD79B antigen

NC

2.94↓

↑ indicates fold of activation; ↓ indicates fold of repression; NC indicates no changes (< 1.2-fold).

Miller et al. Genome Biology 2004 5:R31