Table 1 |
||
|
Genomes contained in Prolinks |
||
| Taxonomy ID |
Name |
Lineage |
|
|
||
| 24 |
Shewanella putrefaciens |
Bacteria |
| 139 |
Borrelia burgdorferi |
Bacteria |
| 158 |
Treponema denticola |
Bacteria |
| 160 |
Treponema pallidum |
Bacteria |
| 197 |
Campylobacter jejuni |
Bacteria |
| 287 |
Pseudomonas aeruginosa |
Bacteria |
| 303 |
Pseudomonas putida |
Bacteria |
| 358 |
Agrobacterium tumefaciens |
Bacteria |
| 382 |
Sinorhizobium meliloti |
Bacteria |
| 485 |
Neisseria gonorrhoeae |
Bacteria |
| 520 |
Bordetella pertussis |
Bacteria |
| 601 |
Salmonella typhi |
Bacteria |
| 632 |
Yersinia pestis |
Bacteria |
| 666 |
Vibrio cholerae |
Bacteria |
| 714 |
Actinobacillus actinomycetemcomitans |
Bacteria |
| 747 |
Pasteurella multocida |
Bacteria |
| 782 |
Rickettsia prowazekii |
Bacteria |
| 837 |
Porphyromonas gingivalis |
Bacteria |
| 881 |
Desulfovibrio vulgaris |
Bacteria |
| 920 |
Acidithiobacillus ferrooxidans |
Bacteria |
| 956 |
Wolbachia sp. |
Bacteria |
| 1097 |
Chlorobium tepidum |
Bacteria |
| 1148 |
Synechocystis sp. PCC 6803 |
Bacteria |
| 1299 |
Deinococcus radiodurans |
Bacteria |
| 1309 |
Streptococcus mutans |
Bacteria |
| 1313 |
Streptococcus pneumoniae |
Bacteria |
| 1314 |
Streptococcus pyogenes |
Bacteria |
| 1351 |
Enterococcus faecalis |
Bacteria |
| 1352 |
Enterococcus faecium |
Bacteria |
| 1360 |
Lactococcus lactis subsp. lactis |
Bacteria |
| 1392 |
Bacillus anthracis |
Bacteria |
| 1423 |
Bacillus subtilis |
Bacteria |
| 1488 |
Clostridium acetobutylicum |
Bacteria |
| 1496 |
Clostridium difficile |
Bacteria |
| 1717 |
Corynebacterium diphtheriae |
Bacteria |
| 1764 |
Mycobacterium avium |
Bacteria |
| 1769 |
Mycobacterium leprae |
Bacteria |
| 1772 |
Mycobacterium smegmatis |
Bacteria |
| 1773 |
Mycobacterium tuberculosis |
Bacteria |
| 2097 |
Mycoplasma genitalium |
Bacteria |
| 2104 |
Mycoplasma pneumoniae |
Bacteria |
| 2107 |
Mycoplasma pulmonis |
Bacteria |
| 2130 |
Ureaplasma urealyticum |
Bacteria |
| 2190 |
Methanocaldococcus jannaschii |
Archaea |
| 2234 |
Archaeoglobus fulgidus |
Archaea |
| 2287 |
Sulfolobus solfataricus |
Archaea |
| 2303 |
Thermoplasma acidophilum |
Archaea |
| 2336 |
Thermotoga maritima |
Bacteria |
| 2371 |
Xylella fastidiosa |
Bacteria |
| 3702 |
Arabidopsis thaliana |
Eukaryota |
| 4932 |
Saccharomyces cerevisiae |
Eukaryota |
| 5476 |
Candida albicans |
Eukaryota |
| 6239 |
Caenorhabditis elegans |
Eukaryota |
| 7227 |
Drosophila melanogaster |
Eukaryota |
| 29292 |
Pyrococcus abyssi |
Archaea |
| 35554 |
Geobacter sulfurreducens |
Bacteria |
| 50339 |
Thermoplasma volcanium |
Archaea |
| 53953 |
Pyrococcus horikoshii |
Archaea |
| 56636 |
Aeropyrum pernix |
Archaea |
| 61435 |
Dehalococcoides ethenogenes |
Bacteria |
| 63363 |
Aquifex aeolicus |
Bacteria |
| 64091 |
Halobacterium sp. NRC-1 |
Archaea |
| 69394 |
Caulobacter vibrioides |
Bacteria |
| 71421 |
Haemophilus influenzae Rd KW20 |
Bacteria |
| 83331 |
Mycobacterium tuberculosis CDC1551 |
Bacteria |
| 83333 |
Escherichia coli K12 |
Bacteria |
| 83334 |
Escherichia coli O157:H7 |
Bacteria |
| 83554 |
Chlamydophila psittaci |
Bacteria |
| 83560 |
Chlamydia muridarum |
Bacteria |
| 85962 |
Helicobacter pylori 26695 |
Bacteria |
| 85963 |
Helicobacter pylori J99 |
Bacteria |
| 86665 |
Bacillus halodurans |
Bacteria |
| 107806 |
Buchnera aphidicola str. APS |
Bacteria |
| 115711 |
Chlamydophila pneumoniae AR39 |
Bacteria |
| 115713 |
Chlamydophila pneumoniae CWL029 |
Bacteria |
| 122586 |
Neisseria meningitidis MC58 |
Bacteria |
| 122587 |
Neisseria meningitidis Z2491 |
Bacteria |
| 129958 |
Carboxydothermus hydrogenoformans |
Bacteria |
| 138677 |
Chlamydophila pneumoniae J138 |
Bacteria |
| 145262 |
Methanothermobacter thermautotrophicus |
Archaea |
| 155864 |
Escherichia coli O157:H7 EDL933 |
Bacteria |
| 158878 |
Staphylococcus aureus subsp. aureus Mu50 |
Bacteria |
| 158879 |
Staphylococcus aureus subsp. aureus N315 |
Bacteria |
|
|
||
|
Bowers et al. Genome Biology 2004 5:R35 |
||
