Table 2 |
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|
Statistical assessment of ELXRdb for mouse and human compared with analogous statistics initially reported by the public human genome sequencing project |
|||
| Mouse |
Human |
HGC [1] |
|
|
|
|||
| Dataset |
|||
| Total RefSeq mRNAs processed |
5,110 |
12,260 |
1,804 |
| Number of primer pairs successfully designed |
59,874 |
179,065 |
|
| Number of exons processed |
44,715 |
123,757 |
|
| Single-exon genes |
348 |
853 |
|
| Averages |
|||
| Intron size |
3,644 bp |
4,573 bp |
3,365 bp |
| Internal intron size |
3,057 bp |
3,876 bp |
|
| Exon size |
218 bp |
244 bp |
|
| Exon number |
8.7 |
10 |
8.8 |
| Initial exon size |
204 bp |
240 bp |
|
| Terminal exon size |
633 bp |
874 bp |
|
| Internal exon size |
143 bp |
151 bp |
145 bp |
| Coding-sequence nucleotides |
1,315 bp |
1,558 bp |
1,340 bp |
| Coding sequence amino acids |
438 |
520 |
447 |
| Genomic extent |
38 kb |
62 kb |
27 kb |
|
|
|||
|
Exon statistics were compiled from Sim4. Coding sequences are as defined in GenBank annotation. Empty fields in the HGC column indicate that there were no values for these measures provided in [1]. |
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|
Schageman et al. Genome Biology 2004 5:R36 |
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