Table 1

START-domain-containing proteins from Arabidopsis

Accession code

Locus

Other names

Structure

Size (aa)

START position

Chr.

Transmembrane segments


NP_172015

At1g05230

-

HD ZLZ START

721

243-466

1

-

NP_564041

At1g17920

-

HD ZLZ START

687

207-438

1

-

NP_174724

At1g34650

-

HD ZLZ START

708

221-454

1

-

NP_177479

At1g73360

-

HD ZLZ START

722

228-458

1

-

NP_565223

At1g79840

GL2

HD ZLZ START

747

253-487

1

-

NP_180796

At2g32370

-

HD ZLZ START

721

245-472

2

-

NP_186976

At3g03260

-

HD ZLZ START

699

205-436

3

-

NP_191674

At3g61150

-

HD ZLZ START

808

312-539

3

-

NP_567183

At4g00730

ANL2, AHDP

HD ZLZ START

802

317-544

4

-

NP_567274

At4g04890

PDF2

HD ZLZ START

743

245-474

4

-

NP_193506

At4g17710

-

HD ZLZ START

709

230-464

4

-

NP_193906

At4g21750

ATML1

HD ZLZ START

762

254-482

4

-

NP_567722

At4g25530

FWA

HD ZLZ START

686

207-435

4

-

NP_197234

At5g17320

-

HD ZLZ START

718

235-462

5

-

NP_199499

At5g46880

-

HD ZLZ START

820

315-549

5

-

NP_200030

At5g52170

-

HD ZLZ START

682

220-427

5

-

NP_174337

At1g30490

PHV, ATHB-9

HD ZIP START

841

162-375

1

-

NP_175627

At1g52150

-

HD ZIP START

836

152-366

1

-

NP_181018

At2g34710

PHB, ATHB-14

HD ZIP START

852

166-383

2

-

NP_195014

At4g32880

ATHB-8

HD ZIP START

833

151-369

4

-

NP_200877

At5g60690

REV, IFL1

HD ZIP START

842

153-366

5

-

NP_180399

At2g28320

-

PH START DUF1336

737

171-364

2

-

NP_191040

At3g54800

-

PH START DUF1336

733

176-370

3

-

NP_193639

At4g19040

-

PH START DUF1336

718

176-392

4

-

NP_199369

At5g45560

-

PH START DUF1336

719

176-392

5

-

NP_568526

At5g35180

-

START DUF1336

778

240-437

5

-

NP_564705

At1g55960

-

START

403

83-289

1

1 (i21-43o)

NP_176653

At1g64720

-

START

385

88-297

1

1 (o20-42i)

NP_850574

At3g13062

-

START

411

84-295

3

1 (i28-50o)

NP_566722

At3g23080

-

START

419

115-329

3

1 (i20-42o)

NP_567433

At4g14500

-

START

433

136-345

4

2 (i21-43o401-423i)

NP_194422

At4g26920

-

START

461

67-228

4

-

NP_196343

At5g07260

-

START

541

99-296

5

-

NP_199791

At5g49800

-

START

242

26-217

5

-

NP_568805

At5g54170

-

START

449

123-337

5

2 (i7-28o402-424i)


GenBank accession codes, locus and other names, structure, total size in amino acids (aa), and position of the START domain are listed. Chr., chromosome number indicates map position. Numbers of predicted transmembrane segments followed by the amino-acid positions separated by 'i' if the loop is on the inside or 'o' if it is on the outside (in parentheses) are indicated. All proteins are represented by ESTs or cDNA clones

Schrick et al. Genome Biology 2004 5:R41   doi:10.1186/gb-2004-5-6-r41

Open Data