Table 8 |
|
|
Co-linkage analysis of genes with gene-centric vocabularies |
|
| Gene name |
Description |
|
|
|
| hnpcc |
Hereditary nonpolyposis colon cancer |
| apc |
Adenomatous polyposis coli protein |
| p53 |
Cellular tumor antigen P53 (tumor suppressor P53) |
| mlh1 |
DNA mismatch repair protein MLH1 (mutL protein homolog 1) |
| muts |
E. coli mismatch repair gene mutS |
| p21 |
Cyclin-dependent kinase inhibitor 1A |
| msh2 |
DNA mismatch repair protein MSH2 (mutS protein homolog 2) |
| bax |
BAX protein, cytoplasmic isoform delta |
| wnt |
Wingless-type MMTV integration site family members |
| pms2 |
DNA mismatch repair protein PMS2 |
| src |
Proto-oncogene tyrosine protein kinase SRC |
| dcc |
Tumor suppressor protein DCC precursor (colorectal cancer suppressor) |
| mcc |
Colorectal mutant cancer protein MCC |
| braf |
Proto-oncogene serine/threonine protein kinase B-RAF |
| fgfr3 |
Fibroblast growth factor receptor 3 precursor |
| hcc |
Hepatocellular carcinoma |
| dra |
Chloride anion exchanger DRA |
| axin2 |
AXIS inhibition protein 2 |
| pms1 |
DNA mismatch repair protein PMS1 |
| abl |
Abelson murine leukemia viral oncogene homolog 1 |
| bub1 |
Mitotic checkpoint serine/threonine protein kinase BUB1 |
| ptp |
Protein tyrosine phosphatase family |
| bcl10 |
B cell lymphoma/leukemia 10 |
| ptp_pest |
Protein tyrosine phosphatase family with C-terminal PEST-motif |
| prlts |
PDGF-receptor beta-like tumor suppressor |
|
|
|
|
This table shows the top-25 colinked gene symbols in the pool of abstracts of the colon and colorectal cancer case. Genes that were not in the query list are indicated in bold. |
|
|
Glenisson et al. Genome Biology 2004 5:R43 doi:10.1186/gb-2004-5-6-r43 |
|
