Analysis of alternative splicing with microarrays: successes and challenges
-
* Corresponding author: Christopher Lee leec@mbi.ucla.edu
Genome Biology 2004, 5:231 doi:10.1186/gb-2004-5-7-231
Accesses
- Last 30 days: 41 accesses
- Last year: 674 accesses
- All time: 5891 accesses
Cited by
BioMed Central: 11 citations
|
Research
Arianna Consiglio, Massimo Carella, Giorgio De Caro, Gianfranco Foglie, Candida Giovannelli, Giorgio Grillo, Massimo Ianigro, Flavio Licciulli, Orazio Palumbo, Ada Piepoli, Elena Ranieri, Sabino Liuni BMC Bioinformatics 2012, 13(Suppl 4):S21 (28 March 2012) |
|
Methodology article
Kevin CH Ha, Jasmin Coulombe-Huntington, Jacek Majewski BMC Genomics 2009, 10:519 (12 November 2009) |
|
Research article
Nikolai P Kandul, Mohamed AF Noor BMC Genetics 2009, 10:67 (19 October 2009) Large introns in the Drosophila Bru-3 gene promote both alternative splicing by exon skipping and exon turnover during evolution, suggesting that large introns could be a reservoir of genetic diversity.
|
|
Methodology article
Gene Expression and Isoform Variation Analysis using Affymetrix Exon Arrays Amandine Bemmo, David Benovoy, Tony Kwan, Daniel J Gaffney, Roderick V Jensen, Jacek Majewski BMC Genomics 2008, 9:529 (7 November 2008) |
|
Research
Functional coordination of alternative splicing in the mammalian central nervous system Matthew Fagnani, Yoseph Barash, Joanna Y Ip, Christine Misquitta, Qun Pan, Arneet L Saltzman, Ofer Shai, Leo Lee, Aviad Rozenhek, Naveed Mohammad, Sandrine Willaime-Morawek, Tomas Babak, Wen Zhang, Timothy R Hughes, Derek van der Kooy, Brendan J Frey, Benjamin J Blencowe Genome Biology 2007, 8:R108 (12 June 2007) A microarray analysis provides new evidence suggesting that specific cellular processes in the mammalian CNS are coordinated at the level of alternative splicing, and that a complex splicing code underlies CNS-specific alternative splicing regulation. |
|
Method
Exon arrays provide accurate assessments of gene expression Karen Kapur, Yi Xing, Zhengqing Ouyang, Wing Wong Genome Biology 2007, 8:R82 (15 May 2007) A strategy for estimating gene expression on Affymetrix exon arrays suggests that these arrays may provide more accurate measurements of gene expression than traditional 3’ arrays. |
|
Methodology article
Ann Hess, Hari Iyer BMC Genomics 2007, 8:96 (9 April 2007) |
|
Research
Davide Rambaldi, Barbara Felice, Viviane Praz, Philip Bucher, Davide Cittaro, Alessandro Guffanti BMC Bioinformatics 2007, 8(Suppl 1):S17 (8 March 2007) |
|
Database
Ari B Kahn, Michael C Ryan, Hongfang Liu, Barry R Zeeberg, D Curtis Jamison, John N Weinstein BMC Bioinformatics 2007, 8:75 (5 March 2007) |
|
Methodology article
Andrew J Holloway, Alicia Oshlack, Dileepa S Diyagama, David DL Bowtell, Gordon K Smyth BMC Bioinformatics 2006, 7:511 (22 November 2006) |
|
Research article
Profiling alternatively spliced mRNA isoforms for prostate cancer classification Chaolin Zhang, Hai-Ri Li, Jian-Bing Fan, Jessica Wang-Rodriguez, Tracy Downs, Xiang-Dong Fu, Michael Q Zhang BMC Bioinformatics 2006, 7:202 (11 April 2006) |